Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm23184-201ENSMUST00000122594 131 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm23887-201ENSMUST00000122683 172 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm26020-201ENSMUST00000122729 183 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm12238-201ENSMUST00000127764 124 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm22433-201ENSMUST00000158550 142 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.56□□□□□ -1.84
Shmt1P50431 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.56□□□□□ -1.84
Shmt1P50431 Mir6336-201ENSMUST00000183581 130 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm27580-201ENSMUST00000183666 149 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm29574-201ENSMUST00000186226 696 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm28828-201ENSMUST00000186601 696 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm28159-201ENSMUST00000190296 696 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm42647-201ENSMUST00000195939 459 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.56□□□□□ -1.84
Shmt1P50431 Gm43955-201ENSMUST00000204332 142 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shmt1P50431 Gm23625-201ENSMUST00000082457 100 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shmt1P50431 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Shmt1P50431 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.56□□□□□ -1.84
Shmt1P50431 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Shmt1P50431 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Shmt1P50431 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.55□□□□□ -1.84
Shmt1P50431 Gm11456-201ENSMUST00000121070 256 ntBASIC3.55□□□□□ -1.84
Shmt1P50431 Gm15244-201ENSMUST00000121122 130 ntBASIC3.55□□□□□ -1.84
Shmt1P50431 Gm22482-201ENSMUST00000122563 359 ntBASIC3.55□□□□□ -1.84
Shmt1P50431 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.55□□□□□ -1.84
Shmt1P50431 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.55□□□□□ -1.84
Shmt1P50431 Gm22036-201ENSMUST00000157279 215 ntBASIC3.55□□□□□ -1.84
Shmt1P50431 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.55□□□□□ -1.84
Shmt1P50431 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.55□□□□□ -1.84
Shmt1P50431 Gm38356-201ENSMUST00000194313 408 ntBASIC3.55□□□□□ -1.84
Shmt1P50431 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.55□□□□□ -1.84
Shmt1P50431 Gm44960-201ENSMUST00000207403 141 ntBASIC3.55□□□□□ -1.84
Shmt1P50431 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Shmt1P50431 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Shmt1P50431 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
Shmt1P50431 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Shmt1P50431 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
Shmt1P50431 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.55□□□□□ -1.84
Shmt1P50431 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Shmt1P50431 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.54□□□□□ -1.84
Shmt1P50431 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Shmt1P50431 Nron-204ENSMUST00000158971 370 ntBASIC3.54□□□□□ -1.84
Shmt1P50431 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Shmt1P50431 Gm25121-201ENSMUST00000179846 79 ntBASIC3.54□□□□□ -1.84
Shmt1P50431 Gm43583-201ENSMUST00000199235 303 ntBASIC3.54□□□□□ -1.84
Shmt1P50431 Gm43217-201ENSMUST00000199513 367 ntBASIC3.54□□□□□ -1.84
Shmt1P50431 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.54□□□□□ -1.84
Shmt1P50431 Gm26457-201ENSMUST00000082678 78 ntBASIC3.54□□□□□ -1.84
Shmt1P50431 AF357428-201ENSMUST00000083815 69 ntBASIC3.54□□□□□ -1.84
Shmt1P50431 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.54□□□□□ -1.84
Shmt1P50431 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Shmt1P50431 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Shmt1P50431 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm23256-201ENSMUST00000102235 110 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm26140-201ENSMUST00000103807 110 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm23578-201ENSMUST00000103943 104 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm24118-201ENSMUST00000103972 126 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Shmt1P50431 Gm23232-201ENSMUST00000157300 105 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm25054-201ENSMUST00000157370 97 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm22722-201ENSMUST00000157467 132 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm26414-201ENSMUST00000157674 269 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm22833-201ENSMUST00000158292 132 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm23474-201ENSMUST00000158884 75 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm22908-201ENSMUST00000177620 110 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm22997-201ENSMUST00000082845 107 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Gm25698-201ENSMUST00000082897 107 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
Shmt1P50431 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.53□□□□□ -1.84
Shmt1P50431 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Shmt1P50431 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Shmt1P50431 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.52□□□□□ -1.85
Shmt1P50431 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Gm22023-201ENSMUST00000104354 130 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Gm23705-201ENSMUST00000104370 130 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Gm13343-201ENSMUST00000116474 105 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Gm24005-201ENSMUST00000158459 296 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Gm22286-201ENSMUST00000179708 107 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.52□□□□□ -1.85
Shmt1P50431 Gm43250-201ENSMUST00000196536 273 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Shmt1P50431 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.52□□□□□ -1.85
Shmt1P50431 Gm45273-201ENSMUST00000211559 281 ntBASIC3.52□□□□□ -1.85
Shmt1P50431 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Shmt1P50431 Gm22806-201ENSMUST00000082738 136 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms