Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm18341-201ENSMUST00000197538 622 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Gm8820-201ENSMUST00000204077 571 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Gm44594-201ENSMUST00000208982 407 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Gm45162-201ENSMUST00000209013 618 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 AC124524.1-201ENSMUST00000225833 181 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Rfx1P48377 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Rfx1P48377 Gm6325-201ENSMUST00000122015 3114 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Rfx1P48377 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Rfx1P48377 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Rfx1P48377 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Rfx1P48377 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Rfx1P48377 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Rfx1P48377 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rfx1P48377 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rfx1P48377 Gm25728-201ENSMUST00000104525 159 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 Gm11874-201ENSMUST00000117437 130 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 Gm23886-201ENSMUST00000122684 313 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 Gm24905-201ENSMUST00000158129 104 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.39□□□□□ -1.71
Rfx1P48377 Gm10067-201ENSMUST00000179462 348 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 Gm29014-201ENSMUST00000191422 326 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 Gm44354-201ENSMUST00000196017 143 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 Gm44650-201ENSMUST00000206929 194 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 Gm17829-201ENSMUST00000219782 344 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.39□□□□□ -1.71
Rfx1P48377 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Rfx1P48377 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Rfx1P48377 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.39□□□□□ -1.71
Rfx1P48377 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Rfx1P48377 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Rfx1P48377 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Rfx1P48377 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Rfx1P48377 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Rfx1P48377 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Rfx1P48377 Gm22784-201ENSMUST00000104088 132 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Gm25726-201ENSMUST00000104529 129 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Mdga2-203ENSMUST00000113942 423 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Gm12252-201ENSMUST00000119517 219 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Gm25805-201ENSMUST00000122788 108 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Gm24061-201ENSMUST00000157489 120 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Gm22316-201ENSMUST00000158012 216 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Gm24056-201ENSMUST00000158617 146 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Snord92-201ENSMUST00000175548 85 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Gm27580-201ENSMUST00000183666 149 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Mir6540-201ENSMUST00000184886 108 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Gm44099-201ENSMUST00000203299 112 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Gm44703-201ENSMUST00000205724 248 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 CT030159.4-201ENSMUST00000221966 395 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Rfx1P48377 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Rfx1P48377 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.38□□□□□ -1.71
Rfx1P48377 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Rfx1P48377 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Rfx1P48377 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Rfx1P48377 Gm37788-201ENSMUST00000193958 2705 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm24121-201ENSMUST00000102029 106 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm24116-201ENSMUST00000103975 107 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm6079-201ENSMUST00000121356 404 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm23982-201ENSMUST00000157141 106 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm23957-201ENSMUST00000157209 90 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm23554-201ENSMUST00000157818 110 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm24392-201ENSMUST00000158136 103 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm25436-201ENSMUST00000158275 145 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm24667-201ENSMUST00000158938 103 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Mir5127-201ENSMUST00000175295 71 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Mir5134-201ENSMUST00000175529 78 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm21893-201ENSMUST00000179119 397 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Mir6370-201ENSMUST00000183510 120 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm8790-201ENSMUST00000194108 322 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm44533-201ENSMUST00000207782 268 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.37□□□□□ -1.71
Rfx1P48377 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.37□□□□□ -1.71
Rfx1P48377 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC4.37□□□□□ -1.71
Rfx1P48377 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Gm26327-201ENSMUST00000093724 111 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Rfx1P48377 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.37□□□□□ -1.71
Rfx1P48377 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
Rfx1P48377 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Rfx1P48377 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Rfx1P48377 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Rfx1P48377 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Rfx1P48377 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Rfx1P48377 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Rfx1P48377 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Rfx1P48377 Gm9119-201ENSMUST00000118866 495 ntBASIC4.36□□□□□ -1.71
Rfx1P48377 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.36□□□□□ -1.71
Rfx1P48377 Gm25454-201ENSMUST00000157947 315 ntBASIC4.36□□□□□ -1.71
Rfx1P48377 Gm22889-201ENSMUST00000158639 58 ntBASIC4.36□□□□□ -1.71
Rfx1P48377 Gm22890-201ENSMUST00000158642 144 ntBASIC4.36□□□□□ -1.71
Rfx1P48377 Gm29104-201ENSMUST00000186304 222 ntBASIC4.36□□□□□ -1.71
Rfx1P48377 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.36□□□□□ -1.71
Rfx1P48377 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms