Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm12191-201ENSMUST00000118307 348 ntBASIC0.27□□□□□ -2.37
HttP42859 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm11904-201ENSMUST00000120562 248 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm28344-201ENSMUST00000185704 279 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm5116-201ENSMUST00000187732 463 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm6003-201ENSMUST00000187903 463 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm29627-201ENSMUST00000187984 463 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm7692-201ENSMUST00000213534 409 ntBASIC0.27□□□□□ -2.37
HttP42859 AC116395.1-201ENSMUST00000225480 1143 ntBASIC0.27□□□□□ -2.37
HttP42859 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
HttP42859 Gm14940-201ENSMUST00000119309 495 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm11857-201ENSMUST00000119817 324 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm5958-201ENSMUST00000147698 297 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm22800-201ENSMUST00000175627 94 ntBASIC0.27□□□□□ -2.37
HttP42859 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm27415-201ENSMUST00000183720 95 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm27640-201ENSMUST00000184580 147 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
HttP42859 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
HttP42859 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
HttP42859 Gm37000-201ENSMUST00000193058 428 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm7897-201ENSMUST00000193981 554 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm44803-201ENSMUST00000204384 156 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm26152-201ENSMUST00000157427 101 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm23124-201ENSMUST00000157650 107 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm17119-201ENSMUST00000163943 280 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm27864-201ENSMUST00000183704 190 ntBASIC0.27□□□□□ -2.37
HttP42859 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC0.27□□□□□ -2.37
HttP42859 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC0.27□□□□□ -2.37
HttP42859 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
HttP42859 Gm12639-201ENSMUST00000121400 493 ntBASIC0.26□□□□□ -2.37
HttP42859 Gm22234-201ENSMUST00000174906 65 ntBASIC0.26□□□□□ -2.37
HttP42859 Gm37213-201ENSMUST00000193077 586 ntBASIC0.26□□□□□ -2.37
HttP42859 Gm19540-201ENSMUST00000221843 810 ntBASIC0.26□□□□□ -2.37
HttP42859 CT025525.3-201ENSMUST00000228858 366 ntBASIC0.26□□□□□ -2.37
HttP42859 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
HttP42859 Gm23245-201ENSMUST00000083370 135 ntBASIC0.26□□□□□ -2.37
HttP42859 Gm22768-201ENSMUST00000158366 153 ntBASIC0.26□□□□□ -2.37
HttP42859 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
HttP42859 Gm27722-201ENSMUST00000183908 76 ntBASIC0.26□□□□□ -2.37
HttP42859 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
HttP42859 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.25□□□□□ -2.37
HttP42859 Gm25621-201ENSMUST00000157223 114 ntBASIC0.25□□□□□ -2.37
HttP42859 Gm25388-201ENSMUST00000157339 151 ntBASIC0.25□□□□□ -2.37
HttP42859 Gm25060-201ENSMUST00000157374 130 ntBASIC0.25□□□□□ -2.37
HttP42859 Gm45273-201ENSMUST00000211559 281 ntBASIC0.25□□□□□ -2.37
HttP42859 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.25□□□□□ -2.37
HttP42859 Gm12889-201ENSMUST00000118684 241 ntBASIC0.25□□□□□ -2.37
HttP42859 Gm11797-201ENSMUST00000121336 754 ntBASIC0.25□□□□□ -2.37
HttP42859 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
HttP42859 Gm38274-201ENSMUST00000195689 148 ntBASIC0.25□□□□□ -2.37
HttP42859 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.25□□□□□ -2.37
HttP42859 AC115357.1-201ENSMUST00000227575 466 ntBASIC0.25□□□□□ -2.37
HttP42859 AC131100.2-201ENSMUST00000227701 998 ntBASIC0.25□□□□□ -2.37
HttP42859 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.24□□□□□ -2.37
HttP42859 Gm37098-201ENSMUST00000192290 244 ntBASIC0.24□□□□□ -2.37
HttP42859 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC0.24□□□□□ -2.37
HttP42859 Gm44384-201ENSMUST00000200208 114 ntBASIC0.24□□□□□ -2.37
HttP42859 AC153662.1-201ENSMUST00000222220 270 ntBASIC0.24□□□□□ -2.37
HttP42859 AC173481.1-201ENSMUST00000223351 270 ntBASIC0.24□□□□□ -2.37
HttP42859 Gm28779-201ENSMUST00000189678 323 ntBASIC0.24□□□□□ -2.37
HttP42859 Gm43286-201ENSMUST00000197420 424 ntBASIC0.24□□□□□ -2.37
HttP42859 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC0.24□□□□□ -2.37
HttP42859 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
HttP42859 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
HttP42859 Gm25799-201ENSMUST00000082643 107 ntBASIC0.24□□□□□ -2.37
HttP42859 Gm44708-201ENSMUST00000205580 2237 ntBASIC0.24□□□□□ -2.37
HttP42859 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC0.24□□□□□ -2.37
HttP42859 Gm23713-201ENSMUST00000157353 70 ntBASIC0.24□□□□□ -2.37
HttP42859 Gm22615-201ENSMUST00000158102 70 ntBASIC0.24□□□□□ -2.37
HttP42859 Gm22944-201ENSMUST00000158662 133 ntBASIC0.24□□□□□ -2.37
HttP42859 Gm25936-201ENSMUST00000179952 114 ntBASIC0.24□□□□□ -2.37
HttP42859 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
HttP42859 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
HttP42859 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC0.24□□□□□ -2.37
HttP42859 Gm45262-201ENSMUST00000209917 1463 ntBASIC0.23□□□□□ -2.37
HttP42859 Gm14868-201ENSMUST00000117840 216 ntBASIC0.23□□□□□ -2.37
HttP42859 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC0.23□□□□□ -2.37
HttP42859 Gm22114-201ENSMUST00000177756 107 ntBASIC0.23□□□□□ -2.37
HttP42859 Gm22061-201ENSMUST00000082557 107 ntBASIC0.23□□□□□ -2.37
HttP42859 Gm23690-201ENSMUST00000083036 94 ntBASIC0.23□□□□□ -2.37
HttP42859 Gm23850-201ENSMUST00000083830 169 ntBASIC0.23□□□□□ -2.37
HttP42859 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.23□□□□□ -2.37
HttP42859 Gm12797-201ENSMUST00000118645 273 ntBASIC0.23□□□□□ -2.37
HttP42859 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
HttP42859 Gm2142-201ENSMUST00000197899 589 ntBASIC0.23□□□□□ -2.37
HttP42859 AC132384.9-201ENSMUST00000218085 277 ntBASIC0.23□□□□□ -2.37
HttP42859 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
HttP42859 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC0.22□□□□□ -2.37
HttP42859 Gm34139-201ENSMUST00000196166 294 ntBASIC0.22□□□□□ -2.37
HttP42859 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
HttP42859 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
HttP42859 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
HttP42859 Gm44679-201ENSMUST00000207202 2908 ntBASIC0.22□□□□□ -2.37
HttP42859 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
HttP42859 Gm12825-201ENSMUST00000120249 563 ntBASIC0.22□□□□□ -2.37
HttP42859 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.22□□□□□ -2.37
HttP42859 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.22□□□□□ -2.37
HttP42859 Gm16404-201ENSMUST00000177739 468 ntBASIC0.22□□□□□ -2.37
HttP42859 Gm7958-201ENSMUST00000178255 468 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms