Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm23586-201ENSMUST00000157657 123 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Gm25163-201ENSMUST00000158905 104 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Traf1P39428 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Traf1P39428 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Traf1P39428 Gm23379-201ENSMUST00000180026 107 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Gm38261-201ENSMUST00000192608 316 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Gm29950-201ENSMUST00000195273 237 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.75□□□□□ -1.97
Traf1P39428 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Gm29809-201ENSMUST00000218423 493 ntBASIC2.75□□□□□ -1.97
Traf1P39428 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.75□□□□□ -1.97
Traf1P39428 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.75□□□□□ -1.97
Traf1P39428 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Gm25859-201ENSMUST00000083710 91 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Traf1P39428 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Traf1P39428 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm25485-201ENSMUST00000104120 132 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm13913-201ENSMUST00000121126 260 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.74□□□□□ -1.97
Traf1P39428 Gm24997-201ENSMUST00000157910 105 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm24210-201ENSMUST00000158263 133 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.74□□□□□ -1.97
Traf1P39428 Gm28597-201ENSMUST00000187664 666 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm2719-201ENSMUST00000191929 444 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm8747-201ENSMUST00000195392 751 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.74□□□□□ -1.97
Traf1P39428 Gm44825-201ENSMUST00000207557 150 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm44598-201ENSMUST00000207566 150 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm45252-201ENSMUST00000211579 397 ntBASIC2.74□□□□□ -1.97
Traf1P39428 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.74□□□□□ -1.97
Traf1P39428 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.74□□□□□ -1.97
Traf1P39428 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Gm24044-201ENSMUST00000083107 156 ntBASIC2.74□□□□□ -1.97
Traf1P39428 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Traf1P39428 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Traf1P39428 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Traf1P39428 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Traf1P39428 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.73□□□□□ -1.97
Traf1P39428 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
Traf1P39428 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Traf1P39428 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.73□□□□□ -1.97
Traf1P39428 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.73□□□□□ -1.97
Traf1P39428 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.73□□□□□ -1.97
Traf1P39428 Gm12872-201ENSMUST00000121835 320 ntBASIC2.73□□□□□ -1.97
Traf1P39428 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.73□□□□□ -1.97
Traf1P39428 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.73□□□□□ -1.97
Traf1P39428 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.73□□□□□ -1.97
Traf1P39428 Gm3852-201ENSMUST00000182781 264 ntBASIC2.73□□□□□ -1.97
Traf1P39428 Gm8151-201ENSMUST00000184817 871 ntBASIC2.73□□□□□ -1.97
Traf1P39428 Trbv6-201ENSMUST00000193743 276 ntBASIC2.73□□□□□ -1.97
Traf1P39428 Gm33354-201ENSMUST00000195448 906 ntBASIC2.73□□□□□ -1.97
Traf1P39428 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.73□□□□□ -1.97
Traf1P39428 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.73□□□□□ -1.97
Traf1P39428 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.73□□□□□ -1.97
Traf1P39428 Gm24150-201ENSMUST00000082759 104 ntBASIC2.73□□□□□ -1.97
Traf1P39428 Gm23040-201ENSMUST00000083869 163 ntBASIC2.73□□□□□ -1.97
Traf1P39428 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.73□□□□□ -1.97
Traf1P39428 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Traf1P39428 Gm22151-201ENSMUST00000116963 58 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm12225-201ENSMUST00000117995 298 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm15896-201ENSMUST00000118045 440 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm15211-201ENSMUST00000118932 528 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm11891-201ENSMUST00000121241 619 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm12779-201ENSMUST00000121496 143 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm22389-201ENSMUST00000158193 301 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm23059-201ENSMUST00000158978 107 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Traf1P39428 Gm20689-201ENSMUST00000176033 279 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm27220-201ENSMUST00000183453 262 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm27959-201ENSMUST00000185172 111 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm37658-201ENSMUST00000192672 315 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.72□□□□□ -1.97
Traf1P39428 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Traf1P39428 Gm8031-201ENSMUST00000213430 626 ntBASIC2.72□□□□□ -1.97
Traf1P39428 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.72□□□□□ -1.97
Traf1P39428 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Traf1P39428 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Traf1P39428 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Traf1P39428 Gm11460-201ENSMUST00000118200 361 ntBASIC2.71□□□□□ -1.98
Traf1P39428 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.71□□□□□ -1.98
Traf1P39428 Gm13862-201ENSMUST00000121220 197 ntBASIC2.71□□□□□ -1.98
Traf1P39428 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.71□□□□□ -1.98
Traf1P39428 Gm22554-201ENSMUST00000157798 147 ntBASIC2.71□□□□□ -1.98
Traf1P39428 Gm24885-201ENSMUST00000158783 270 ntBASIC2.71□□□□□ -1.98
Traf1P39428 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.71□□□□□ -1.98
Traf1P39428 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.71□□□□□ -1.98
Traf1P39428 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.71□□□□□ -1.98
Traf1P39428 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.71□□□□□ -1.98
Traf1P39428 Gm44844-201ENSMUST00000207242 336 ntBASIC2.71□□□□□ -1.98
Traf1P39428 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.71□□□□□ -1.98
Traf1P39428 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Traf1P39428 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms