Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.43□□□□□ -1.86
LdlrP35951 Gm23602-201ENSMUST00000157258 132 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm23592-201ENSMUST00000157859 117 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm24264-201ENSMUST00000179835 94 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm26928-201ENSMUST00000182674 572 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm27545-201ENSMUST00000184755 202 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm29574-201ENSMUST00000186226 696 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm28828-201ENSMUST00000186601 696 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm28159-201ENSMUST00000190296 696 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm43529-201ENSMUST00000199178 412 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm43583-201ENSMUST00000199235 303 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm34091-201ENSMUST00000200875 604 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.43□□□□□ -1.86
LdlrP35951 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Gm10161-201ENSMUST00000091506 204 ntBASIC3.43□□□□□ -1.86
LdlrP35951 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LdlrP35951 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
LdlrP35951 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
LdlrP35951 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
LdlrP35951 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
LdlrP35951 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.42□□□□□ -1.86
LdlrP35951 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LdlrP35951 Mir541-201ENSMUST00000102097 90 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm12417-201ENSMUST00000119153 403 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm13729-201ENSMUST00000120328 406 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm14846-201ENSMUST00000121868 216 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm22145-201ENSMUST00000157396 148 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm22310-201ENSMUST00000157509 116 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm23755-201ENSMUST00000157578 343 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm4479-201ENSMUST00000178807 171 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LdlrP35951 Gm18486-201ENSMUST00000184040 298 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm27477-201ENSMUST00000184649 143 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm42647-201ENSMUST00000195939 459 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.42□□□□□ -1.86
LdlrP35951 Mir3535-201ENSMUST00000197651 147 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm36776-201ENSMUST00000207006 203 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LdlrP35951 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.42□□□□□ -1.86
LdlrP35951 Gm21007-201ENSMUST00000221024 326 ntBASIC3.42□□□□□ -1.86
LdlrP35951 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LdlrP35951 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LdlrP35951 Gm26457-201ENSMUST00000082678 78 ntBASIC3.42□□□□□ -1.86
LdlrP35951 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
LdlrP35951 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LdlrP35951 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.41□□□□□ -1.86
LdlrP35951 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LdlrP35951 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LdlrP35951 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm16005-201ENSMUST00000120515 269 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm24839-201ENSMUST00000122602 107 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm22034-201ENSMUST00000157283 134 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm25390-201ENSMUST00000157341 103 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm25425-201ENSMUST00000157611 96 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm24001-201ENSMUST00000158463 85 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm3370-201ENSMUST00000171785 500 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm18520-201ENSMUST00000174783 658 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm23415-201ENSMUST00000175519 83 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm27421-201ENSMUST00000184729 167 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm28591-201ENSMUST00000185259 183 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LdlrP35951 Gm6615-201ENSMUST00000199426 631 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm44938-201ENSMUST00000208614 427 ntBASIC3.41□□□□□ -1.86
LdlrP35951 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.41□□□□□ -1.86
LdlrP35951 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm22685-201ENSMUST00000082848 106 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm23731-201ENSMUST00000083749 107 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LdlrP35951 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.41□□□□□ -1.86
LdlrP35951 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LdlrP35951 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LdlrP35951 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
LdlrP35951 Gm11572-201ENSMUST00000119164 120 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm5762-201ENSMUST00000119204 258 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm12412-201ENSMUST00000121867 328 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm26479-201ENSMUST00000122620 106 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm25450-201ENSMUST00000179144 107 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm27585-201ENSMUST00000183717 199 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm27648-201ENSMUST00000184315 107 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LdlrP35951 Gm29657-201ENSMUST00000189807 342 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm37162-201ENSMUST00000191708 551 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm37089-201ENSMUST00000195616 129 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm43955-201ENSMUST00000204332 142 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm9712-201ENSMUST00000210842 311 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.4□□□□□ -1.87
LdlrP35951 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm35405-201ENSMUST00000218754 400 ntBASIC3.4□□□□□ -1.87
LdlrP35951 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.4□□□□□ -1.87
LdlrP35951 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm22806-201ENSMUST00000082738 136 ntBASIC3.4□□□□□ -1.87
LdlrP35951 Gm22353-201ENSMUST00000083918 136 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms