Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm24497-201ENSMUST00000177868 191 ntBASIC1.91□□□□□ -2.1
P20040 Gm25939-201ENSMUST00000179876 191 ntBASIC1.91□□□□□ -2.1
P20040 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
P20040 Gm44477-201ENSMUST00000199661 110 ntBASIC1.91□□□□□ -2.1
P20040 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.91□□□□□ -2.1
P20040 Gm45366-201ENSMUST00000209828 384 ntBASIC1.91□□□□□ -2.1
P20040 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.91□□□□□ -2.1
P20040 Gm6109-201ENSMUST00000223297 348 ntBASIC1.91□□□□□ -2.1
P20040 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.91□□□□□ -2.1
P20040 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.91□□□□□ -2.1
P20040 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.91□□□□□ -2.1
P20040 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
P20040 Gm23444-201ENSMUST00000082922 191 ntBASIC1.91□□□□□ -2.1
P20040 Gm22572-201ENSMUST00000082985 105 ntBASIC1.91□□□□□ -2.1
P20040 Mir10a-201ENSMUST00000083585 110 ntBASIC1.91□□□□□ -2.1
P20040 Snora69-201ENSMUST00000083708 131 ntBASIC1.91□□□□□ -2.1
P20040 Gm22353-201ENSMUST00000083918 136 ntBASIC1.91□□□□□ -2.1
P20040 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
P20040 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.91□□□□□ -2.1
P20040 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
P20040 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.9□□□□□ -2.11
P20040 Gm23422-201ENSMUST00000102000 107 ntBASIC1.9□□□□□ -2.11
P20040 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
P20040 Gm15896-201ENSMUST00000118045 440 ntBASIC1.9□□□□□ -2.11
P20040 Gm14362-201ENSMUST00000121679 273 ntBASIC1.9□□□□□ -2.11
P20040 Gm15254-201ENSMUST00000149567 273 ntBASIC1.9□□□□□ -2.11
P20040 Gm23332-201ENSMUST00000157424 275 ntBASIC1.9□□□□□ -2.11
P20040 Gm23124-201ENSMUST00000157650 107 ntBASIC1.9□□□□□ -2.11
P20040 Gm23586-201ENSMUST00000157657 123 ntBASIC1.9□□□□□ -2.11
P20040 Gm22535-201ENSMUST00000158174 119 ntBASIC1.9□□□□□ -2.11
P20040 Gm25707-201ENSMUST00000175120 96 ntBASIC1.9□□□□□ -2.11
P20040 Mir5118-201ENSMUST00000175551 67 ntBASIC1.9□□□□□ -2.11
P20040 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.9□□□□□ -2.11
P20040 Gm37557-201ENSMUST00000191640 139 ntBASIC1.9□□□□□ -2.11
P20040 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.9□□□□□ -2.11
P20040 Gm43587-201ENSMUST00000199590 204 ntBASIC1.9□□□□□ -2.11
P20040 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.9□□□□□ -2.11
P20040 Gm44818-201ENSMUST00000206608 358 ntBASIC1.9□□□□□ -2.11
P20040 Gm9377-201ENSMUST00000207227 623 ntBASIC1.9□□□□□ -2.11
P20040 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.9□□□□□ -2.11
P20040 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
P20040 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.9□□□□□ -2.11
P20040 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.9□□□□□ -2.11
P20040 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
P20040 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
P20040 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
P20040 Gm14774-201ENSMUST00000117857 536 ntBASIC1.89□□□□□ -2.11
P20040 Gm12934-201ENSMUST00000119221 343 ntBASIC1.89□□□□□ -2.11
P20040 Gm15266-201ENSMUST00000119635 255 ntBASIC1.89□□□□□ -2.11
P20040 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.89□□□□□ -2.11
P20040 Gm27396-201ENSMUST00000157708 58 ntBASIC1.89□□□□□ -2.11
P20040 Gm22554-201ENSMUST00000157798 147 ntBASIC1.89□□□□□ -2.11
P20040 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.89□□□□□ -2.11
P20040 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.89□□□□□ -2.11
P20040 Gm25996-201ENSMUST00000175393 117 ntBASIC1.89□□□□□ -2.11
P20040 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.89□□□□□ -2.11
P20040 Mir378a-201ENSMUST00000198300 66 ntBASIC1.89□□□□□ -2.11
P20040 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.89□□□□□ -2.11
P20040 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.89□□□□□ -2.11
P20040 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.89□□□□□ -2.11
P20040 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
P20040 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
P20040 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
P20040 Gm22806-201ENSMUST00000082738 136 ntBASIC1.89□□□□□ -2.11
P20040 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
P20040 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
P20040 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
P20040 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
P20040 Gm25414-201ENSMUST00000101814 107 ntBASIC1.88□□□□□ -2.11
P20040 Gm23551-201ENSMUST00000116852 121 ntBASIC1.88□□□□□ -2.11
P20040 Gm12393-201ENSMUST00000117084 848 ntBASIC1.88□□□□□ -2.11
P20040 Gm14670-201ENSMUST00000117327 337 ntBASIC1.88□□□□□ -2.11
P20040 Gm13378-201ENSMUST00000117483 336 ntBASIC1.88□□□□□ -2.11
P20040 Gm14943-201ENSMUST00000118056 546 ntBASIC1.88□□□□□ -2.11
P20040 Gm12053-201ENSMUST00000119022 252 ntBASIC1.88□□□□□ -2.11
P20040 Gm12806-201ENSMUST00000119384 268 ntBASIC1.88□□□□□ -2.11
P20040 Gm14588-201ENSMUST00000119895 172 ntBASIC1.88□□□□□ -2.11
P20040 Gm12956-201ENSMUST00000122184 414 ntBASIC1.88□□□□□ -2.11
P20040 Gm23184-201ENSMUST00000122594 131 ntBASIC1.88□□□□□ -2.11
P20040 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
P20040 Gm23324-201ENSMUST00000157421 131 ntBASIC1.88□□□□□ -2.11
P20040 Gm25339-201ENSMUST00000157458 232 ntBASIC1.88□□□□□ -2.11
P20040 Gm22257-201ENSMUST00000158687 301 ntBASIC1.88□□□□□ -2.11
P20040 Gm26622-201ENSMUST00000180520 298 ntBASIC1.88□□□□□ -2.11
P20040 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
P20040 Gm27991-201ENSMUST00000184804 137 ntBASIC1.88□□□□□ -2.11
P20040 Mir6376-201ENSMUST00000185149 131 ntBASIC1.88□□□□□ -2.11
P20040 Mir3068-202ENSMUST00000197755 79 ntBASIC1.88□□□□□ -2.11
P20040 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.88□□□□□ -2.11
P20040 Mir7217-201ENSMUST00000200304 62 ntBASIC1.88□□□□□ -2.11
P20040 Gm44083-201ENSMUST00000203114 337 ntBASIC1.88□□□□□ -2.11
P20040 Gm44182-201ENSMUST00000204052 115 ntBASIC1.88□□□□□ -2.11
P20040 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
P20040 Gm18991-201ENSMUST00000209225 746 ntBASIC1.88□□□□□ -2.11
P20040 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.88□□□□□ -2.11
P20040 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.88□□□□□ -2.11
P20040 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.88□□□□□ -2.11
P20040 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.88□□□□□ -2.11
P20040 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.88□□□□□ -2.11
P20040 Gm22620-201ENSMUST00000082700 133 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms