Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm25913-201ENSMUST00000157617 135 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm25716-201ENSMUST00000158628 104 ntBASIC4.18□□□□□ -1.74
RaraP11416 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm27695-201ENSMUST00000184301 91 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm44354-201ENSMUST00000196017 143 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm43853-201ENSMUST00000197162 301 ntBASIC4.18□□□□□ -1.74
RaraP11416 Snord80-202ENSMUST00000199023 77 ntBASIC4.18□□□□□ -1.74
RaraP11416 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm23518-201ENSMUST00000082835 153 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm23443-201ENSMUST00000082916 128 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm25481-201ENSMUST00000083221 158 ntBASIC4.18□□□□□ -1.74
RaraP11416 Mir384-201ENSMUST00000083565 88 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm37788-201ENSMUST00000193958 2705 ntBASIC4.18□□□□□ -1.74
RaraP11416 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RaraP11416 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RaraP11416 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RaraP11416 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RaraP11416 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.17□□□□□ -1.74
RaraP11416 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RaraP11416 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
RaraP11416 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.17□□□□□ -1.74
RaraP11416 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RaraP11416 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RaraP11416 Snord66-201ENSMUST00000104051 75 ntBASIC4.17□□□□□ -1.74
RaraP11416 Gm22779-201ENSMUST00000104085 107 ntBASIC4.17□□□□□ -1.74
RaraP11416 Mir1b-201ENSMUST00000117012 122 ntBASIC4.17□□□□□ -1.74
RaraP11416 Gm14629-201ENSMUST00000122428 144 ntBASIC4.17□□□□□ -1.74
RaraP11416 Gm23642-201ENSMUST00000157858 258 ntBASIC4.17□□□□□ -1.74
RaraP11416 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RaraP11416 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.17□□□□□ -1.74
RaraP11416 Gm44343-201ENSMUST00000196702 90 ntBASIC4.17□□□□□ -1.74
RaraP11416 Gm8820-201ENSMUST00000204077 571 ntBASIC4.17□□□□□ -1.74
RaraP11416 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.17□□□□□ -1.74
RaraP11416 Gm9174-201ENSMUST00000078149 255 ntBASIC4.17□□□□□ -1.74
RaraP11416 Gm24966-201ENSMUST00000082443 79 ntBASIC4.17□□□□□ -1.74
RaraP11416 Mir323-201ENSMUST00000083683 86 ntBASIC4.17□□□□□ -1.74
RaraP11416 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RaraP11416 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RaraP11416 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.17□□□□□ -1.74
RaraP11416 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.17□□□□□ -1.74
RaraP11416 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.16□□□□□ -1.74
RaraP11416 Gm24015-201ENSMUST00000157725 232 ntBASIC4.16□□□□□ -1.74
RaraP11416 Gm26001-201ENSMUST00000157989 103 ntBASIC4.16□□□□□ -1.74
RaraP11416 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.16□□□□□ -1.74
RaraP11416 Gm22395-201ENSMUST00000177427 96 ntBASIC4.16□□□□□ -1.74
RaraP11416 Gm27220-201ENSMUST00000183453 262 ntBASIC4.16□□□□□ -1.74
RaraP11416 Mir7014-201ENSMUST00000183853 63 ntBASIC4.16□□□□□ -1.74
RaraP11416 Gm27733-201ENSMUST00000184803 68 ntBASIC4.16□□□□□ -1.74
RaraP11416 Gm29104-201ENSMUST00000186304 222 ntBASIC4.16□□□□□ -1.74
RaraP11416 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.16□□□□□ -1.74
RaraP11416 Mir721-201ENSMUST00000200230 88 ntBASIC4.16□□□□□ -1.74
RaraP11416 Gm45013-201ENSMUST00000206883 178 ntBASIC4.16□□□□□ -1.74
RaraP11416 Gm24762-201ENSMUST00000083689 104 ntBASIC4.16□□□□□ -1.74
RaraP11416 Gm10360-201ENSMUST00000097219 272 ntBASIC4.16□□□□□ -1.74
RaraP11416 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RaraP11416 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RaraP11416 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RaraP11416 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.15□□□□□ -1.74
RaraP11416 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
RaraP11416 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RaraP11416 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RaraP11416 Gm24482-201ENSMUST00000117005 93 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm14073-201ENSMUST00000117344 381 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm12427-201ENSMUST00000117719 302 ntBASIC4.15□□□□□ -1.75
RaraP11416 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm16250-201ENSMUST00000148974 256 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm23957-201ENSMUST00000157209 90 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm22211-201ENSMUST00000158097 156 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm25494-201ENSMUST00000158143 100 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm24930-201ENSMUST00000158315 83 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm26291-201ENSMUST00000158889 137 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.15□□□□□ -1.75
RaraP11416 Gm6625-201ENSMUST00000177870 272 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm27952-201ENSMUST00000184748 105 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm27520-201ENSMUST00000184872 81 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm18982-201ENSMUST00000198118 529 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm44470-201ENSMUST00000203913 142 ntBASIC4.15□□□□□ -1.75
RaraP11416 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.15□□□□□ -1.75
RaraP11416 Gm18991-201ENSMUST00000209225 746 ntBASIC4.15□□□□□ -1.75
RaraP11416 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.15□□□□□ -1.75
RaraP11416 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm25800-201ENSMUST00000082636 134 ntBASIC4.15□□□□□ -1.75
RaraP11416 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC4.15□□□□□ -1.75
RaraP11416 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RaraP11416 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RaraP11416 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.15□□□□□ -1.75
RaraP11416 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.15□□□□□ -1.75
RaraP11416 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RaraP11416 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.14□□□□□ -1.75
RaraP11416 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RaraP11416 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.14□□□□□ -1.75
RaraP11416 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.14□□□□□ -1.75
RaraP11416 Gm9157-201ENSMUST00000117673 225 ntBASIC4.14□□□□□ -1.75
RaraP11416 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.14□□□□□ -1.75
RaraP11416 Gm14748-201ENSMUST00000119819 411 ntBASIC4.14□□□□□ -1.75
RaraP11416 Gm15926-201ENSMUST00000120492 550 ntBASIC4.14□□□□□ -1.75
RaraP11416 Gm22613-201ENSMUST00000122679 292 ntBASIC4.14□□□□□ -1.75
RaraP11416 Mir5134-201ENSMUST00000175529 78 ntBASIC4.14□□□□□ -1.75
RaraP11416 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC4.14□□□□□ -1.75
RaraP11416 Gm28000-201ENSMUST00000184380 85 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 142 ms