Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Mir107-201ENSMUST00000083660 87 ntBASIC2.33□□□□□ -2.04
Lire1P11260 Gm24493-201ENSMUST00000083805 143 ntBASIC2.33□□□□□ -2.04
Lire1P11260 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Lire1P11260 Gm13728-201ENSMUST00000117471 400 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm15692-201ENSMUST00000152173 352 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm25392-201ENSMUST00000157335 297 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm23829-201ENSMUST00000157392 270 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm25888-201ENSMUST00000157778 302 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm22534-201ENSMUST00000158173 104 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Mir3086-201ENSMUST00000175072 87 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Zfp950-206ENSMUST00000178819 171 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm18356-201ENSMUST00000185677 623 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm45071-201ENSMUST00000205353 571 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm44844-201ENSMUST00000207242 336 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.32□□□□□ -2.04
Lire1P11260 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Lire1P11260 Gm24045-201ENSMUST00000083113 98 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm22353-201ENSMUST00000083918 136 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.32□□□□□ -2.04
Lire1P11260 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Lire1P11260 Gm12393-201ENSMUST00000117084 848 ntBASIC2.31□□□□□ -2.04
Lire1P11260 Gm11221-201ENSMUST00000117230 597 ntBASIC2.31□□□□□ -2.04
Lire1P11260 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.31□□□□□ -2.04
Lire1P11260 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.31□□□□□ -2.04
Lire1P11260 Gm24075-201ENSMUST00000158175 72 ntBASIC2.31□□□□□ -2.04
Lire1P11260 Gm23777-201ENSMUST00000158994 259 ntBASIC2.31□□□□□ -2.04
Lire1P11260 Gm25994-201ENSMUST00000175392 101 ntBASIC2.31□□□□□ -2.04
Lire1P11260 Gm22851-201ENSMUST00000178741 94 ntBASIC2.31□□□□□ -2.04
Lire1P11260 Gm25074-201ENSMUST00000178782 94 ntBASIC2.31□□□□□ -2.04
Lire1P11260 Gm24168-201ENSMUST00000178825 107 ntBASIC2.31□□□□□ -2.04
Lire1P11260 Gm44564-201ENSMUST00000207985 180 ntBASIC2.31□□□□□ -2.04
Lire1P11260 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.31□□□□□ -2.04
Lire1P11260 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.31□□□□□ -2.04
Lire1P11260 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Lire1P11260 Gm23422-201ENSMUST00000102000 107 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm4732-201ENSMUST00000118778 473 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm7916-201ENSMUST00000120325 456 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm11786-201ENSMUST00000120799 155 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm12926-201ENSMUST00000121158 409 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm23889-201ENSMUST00000122689 104 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.3□□□□□ -2.04
Lire1P11260 Gm22227-201ENSMUST00000157356 259 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Mir1949-201ENSMUST00000157434 141 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm23642-201ENSMUST00000157858 258 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm24885-201ENSMUST00000158783 270 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm43510-201ENSMUST00000197922 353 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm43680-201ENSMUST00000199466 340 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm43264-201ENSMUST00000202284 325 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm18774-201ENSMUST00000218269 601 ntBASIC2.3□□□□□ -2.04
Lire1P11260 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Lire1P11260 Gm22062-201ENSMUST00000082563 107 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Lire1P11260 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.3□□□□□ -2.04
Lire1P11260 Gm12304-201ENSMUST00000120312 385 ntBASIC2.29□□□□□ -2.04
Lire1P11260 Gm14765-201ENSMUST00000121954 326 ntBASIC2.29□□□□□ -2.04
Lire1P11260 Gm26102-201ENSMUST00000157251 284 ntBASIC2.29□□□□□ -2.04
Lire1P11260 Gm26411-201ENSMUST00000157668 107 ntBASIC2.29□□□□□ -2.04
Lire1P11260 Gm25413-201ENSMUST00000158544 312 ntBASIC2.29□□□□□ -2.04
Lire1P11260 Gm9593-201ENSMUST00000166034 469 ntBASIC2.29□□□□□ -2.04
Lire1P11260 Gm37533-201ENSMUST00000193848 545 ntBASIC2.29□□□□□ -2.04
Lire1P11260 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.29□□□□□ -2.04
Lire1P11260 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.29□□□□□ -2.04
Lire1P11260 Gm24412-201ENSMUST00000083426 109 ntBASIC2.29□□□□□ -2.04
Lire1P11260 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.29□□□□□ -2.04
Lire1P11260 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Lire1P11260 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Lire1P11260 Gm22494-201ENSMUST00000104495 128 ntBASIC2.28□□□□□ -2.04
Lire1P11260 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.28□□□□□ -2.04
Lire1P11260 Gm22083-201ENSMUST00000157586 102 ntBASIC2.28□□□□□ -2.04
Lire1P11260 Gm23025-201ENSMUST00000158769 111 ntBASIC2.28□□□□□ -2.04
Lire1P11260 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.28□□□□□ -2.04
Lire1P11260 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.28□□□□□ -2.04
Lire1P11260 CT009733.1-203ENSMUST00000224033 451 ntBASIC2.28□□□□□ -2.04
Lire1P11260 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Lire1P11260 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Lire1P11260 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Lire1P11260 Gm25529-201ENSMUST00000104850 92 ntBASIC2.27□□□□□ -2.05
Lire1P11260 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Lire1P11260 Mir3096-201ENSMUST00000116685 71 ntBASIC2.27□□□□□ -2.05
Lire1P11260 Gm13409-201ENSMUST00000122072 546 ntBASIC2.27□□□□□ -2.05
Lire1P11260 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.27□□□□□ -2.05
Lire1P11260 Gm24241-201ENSMUST00000157787 145 ntBASIC2.27□□□□□ -2.05
Lire1P11260 Gm25012-201ENSMUST00000158396 164 ntBASIC2.27□□□□□ -2.05
Lire1P11260 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.27□□□□□ -2.05
Lire1P11260 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.27□□□□□ -2.05
Lire1P11260 Gm37377-201ENSMUST00000191733 304 ntBASIC2.27□□□□□ -2.05
Lire1P11260 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.27□□□□□ -2.05
Lire1P11260 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.27□□□□□ -2.05
Lire1P11260 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.27□□□□□ -2.05
Lire1P11260 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.27□□□□□ -2.05
Lire1P11260 Gm25124-201ENSMUST00000083345 164 ntBASIC2.27□□□□□ -2.05
Lire1P11260 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Lire1P11260 Gm26384-201ENSMUST00000102183 110 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.26□□□□□ -2.05
Lire1P11260 Gm22678-201ENSMUST00000116974 101 ntBASIC2.26□□□□□ -2.05
Lire1P11260 Gm15077-201ENSMUST00000122344 362 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms