Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm22806-201ENSMUST00000082738 136 ntBASIC3.37□□□□□ -1.87
Hoxd4P10628 Gm24762-201ENSMUST00000083689 104 ntBASIC3.37□□□□□ -1.87
Hoxd4P10628 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.37□□□□□ -1.87
Hoxd4P10628 Gm22353-201ENSMUST00000083918 136 ntBASIC3.37□□□□□ -1.87
Hoxd4P10628 Gm10212-201ENSMUST00000087884 324 ntBASIC3.37□□□□□ -1.87
Hoxd4P10628 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hoxd4P10628 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.37□□□□□ -1.87
Hoxd4P10628 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxd4P10628 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxd4P10628 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxd4P10628 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Hoxd4P10628 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hoxd4P10628 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Hoxd4P10628 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Hoxd4P10628 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm24172-201ENSMUST00000104127 117 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm15313-201ENSMUST00000119179 282 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm14748-201ENSMUST00000119819 411 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm13419-201ENSMUST00000121711 271 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm25115-201ENSMUST00000157187 140 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm24015-201ENSMUST00000157725 232 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm22212-201ENSMUST00000158096 106 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm25224-201ENSMUST00000158195 68 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm22767-201ENSMUST00000158365 165 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Mir5129-201ENSMUST00000174938 78 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.36□□□□□ -1.87
Hoxd4P10628 Mir721-201ENSMUST00000200230 88 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm44032-201ENSMUST00000204841 166 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm10042-201ENSMUST00000079884 78 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm24204-201ENSMUST00000082950 107 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Hoxd4P10628 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.36□□□□□ -1.87
Hoxd4P10628 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Hoxd4P10628 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hoxd4P10628 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hoxd4P10628 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Hoxd4P10628 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Hoxd4P10628 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Mir551b-201ENSMUST00000102165 98 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm26293-201ENSMUST00000104170 84 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm13873-201ENSMUST00000119208 427 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm15760-201ENSMUST00000119553 283 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm26476-201ENSMUST00000122618 313 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.35□□□□□ -1.87
Hoxd4P10628 Mir1967-201ENSMUST00000157789 82 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm26171-201ENSMUST00000158422 131 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm26219-201ENSMUST00000175216 71 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm22108-201ENSMUST00000177961 106 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm22367-201ENSMUST00000178930 132 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm24798-201ENSMUST00000179334 106 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.35□□□□□ -1.87
Hoxd4P10628 Mir6372-201ENSMUST00000185114 109 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm43978-201ENSMUST00000203491 451 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm25930-201ENSMUST00000082785 107 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Hoxd4P10628 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.35□□□□□ -1.87
Hoxd4P10628 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd4P10628 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hoxd4P10628 BC051076-202ENSMUST00000199477 2868 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd4P10628 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd4P10628 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
Hoxd4P10628 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm22936-201ENSMUST00000103955 126 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm14687-201ENSMUST00000120206 363 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm25985-201ENSMUST00000122677 107 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.34□□□□□ -1.87
Hoxd4P10628 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm25283-201ENSMUST00000157272 77 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm26195-201ENSMUST00000175035 101 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.34□□□□□ -1.87
Hoxd4P10628 Mir6537-201ENSMUST00000184150 110 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm27760-201ENSMUST00000185048 114 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Gm28627-201ENSMUST00000186141 453 ntBASIC3.34□□□□□ -1.87
Hoxd4P10628 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.34□□□□□ -1.87
Hoxd4P10628 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms