Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm22749-201ENSMUST00000082490 107 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm26228-201ENSMUST00000082512 107 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm25080-201ENSMUST00000082526 107 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm24856-201ENSMUST00000082809 107 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm25258-201ENSMUST00000083049 107 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm24535-201ENSMUST00000083140 107 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm25518-201ENSMUST00000083864 107 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Gm22352-201ENSMUST00000083917 107 ntBASIC2.97□□□□□ -1.93
Col3a1P08121 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Col3a1P08121 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col3a1P08121 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
Col3a1P08121 Gm15211-201ENSMUST00000118932 528 ntBASIC2.96□□□□□ -1.93
Col3a1P08121 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.96□□□□□ -1.93
Col3a1P08121 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.96□□□□□ -1.93
Col3a1P08121 Gm24436-201ENSMUST00000157889 302 ntBASIC2.96□□□□□ -1.93
Col3a1P08121 Gm25454-201ENSMUST00000157947 315 ntBASIC2.96□□□□□ -1.93
Col3a1P08121 Gm25643-201ENSMUST00000158874 103 ntBASIC2.96□□□□□ -1.93
Col3a1P08121 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
Col3a1P08121 Gm16232-201ENSMUST00000162856 167 ntBASIC2.96□□□□□ -1.93
Col3a1P08121 Gm23523-201ENSMUST00000180190 107 ntBASIC2.96□□□□□ -1.93
Col3a1P08121 Gm27535-201ENSMUST00000183814 157 ntBASIC2.96□□□□□ -1.93
Col3a1P08121 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.96□□□□□ -1.93
Col3a1P08121 Gm23412-201ENSMUST00000083017 107 ntBASIC2.96□□□□□ -1.93
Col3a1P08121 Gm10212-201ENSMUST00000087884 324 ntBASIC2.96□□□□□ -1.93
Col3a1P08121 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Col3a1P08121 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Col3a1P08121 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC2.96□□□□□ -1.94
Col3a1P08121 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.96□□□□□ -1.94
Col3a1P08121 Gm23424-201ENSMUST00000103889 110 ntBASIC2.96□□□□□ -1.94
Col3a1P08121 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Col3a1P08121 Gm14119-201ENSMUST00000119511 235 ntBASIC2.96□□□□□ -1.94
Col3a1P08121 Gm14915-201ENSMUST00000120747 204 ntBASIC2.96□□□□□ -1.94
Col3a1P08121 Mir5099-201ENSMUST00000175257 74 ntBASIC2.96□□□□□ -1.94
Col3a1P08121 Gm22290-201ENSMUST00000177655 107 ntBASIC2.96□□□□□ -1.94
Col3a1P08121 Gm22583-201ENSMUST00000178031 107 ntBASIC2.96□□□□□ -1.94
Col3a1P08121 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Col3a1P08121 Gm29330-201ENSMUST00000190032 699 ntBASIC2.96□□□□□ -1.94
Col3a1P08121 Gm29262-201ENSMUST00000190084 196 ntBASIC2.96□□□□□ -1.94
Col3a1P08121 Mir497-201ENSMUST00000200557 84 ntBASIC2.96□□□□□ -1.94
Col3a1P08121 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Col3a1P08121 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.96□□□□□ -1.94
Col3a1P08121 n-R5s220-201ENSMUST00000082926 120 ntBASIC2.96□□□□□ -1.94
Col3a1P08121 Gm37899-201ENSMUST00000193116 8717 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col3a1P08121 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 Gm23048-201ENSMUST00000157237 129 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 Gm23230-201ENSMUST00000157298 133 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 Gm36954-201ENSMUST00000195362 363 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Col3a1P08121 Gm43975-201ENSMUST00000203023 481 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 Gm45395-201ENSMUST00000209891 559 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.95□□□□□ -1.94
Col3a1P08121 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col3a1P08121 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Col3a1P08121 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col3a1P08121 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col3a1P08121 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col3a1P08121 n-R5s52-201ENSMUST00000104614 113 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm14669-201ENSMUST00000118841 250 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm5384-201ENSMUST00000120313 463 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm23167-201ENSMUST00000157155 103 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm24909-201ENSMUST00000157290 280 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Mir3106-201ENSMUST00000175401 82 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm25156-201ENSMUST00000179809 79 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm11395-201ENSMUST00000181011 499 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm27399-201ENSMUST00000184250 78 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 AC124549.2-201ENSMUST00000224243 222 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm22997-201ENSMUST00000082845 107 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm23460-201ENSMUST00000083258 109 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm25792-201ENSMUST00000083289 100 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Gm23451-201ENSMUST00000083328 122 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.94□□□□□ -1.94
Col3a1P08121 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col3a1P08121 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Col3a1P08121 Gm12782-201ENSMUST00000117519 727 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm14652-201ENSMUST00000118479 235 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm14013-201ENSMUST00000119006 270 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm12771-201ENSMUST00000120246 135 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm16358-201ENSMUST00000146046 210 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm23779-201ENSMUST00000157938 64 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm2389-201ENSMUST00000160487 189 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm24618-201ENSMUST00000177718 94 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm23953-201ENSMUST00000178214 94 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm26332-201ENSMUST00000179813 94 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm22863-201ENSMUST00000180265 94 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm26622-201ENSMUST00000180520 298 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm38044-201ENSMUST00000192964 487 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Gm25820-201ENSMUST00000198589 127 ntBASIC2.93□□□□□ -1.94
Col3a1P08121 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms