Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.41□□□□□ -2.02
P04224 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.41□□□□□ -2.02
P04224 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.41□□□□□ -2.02
P04224 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.41□□□□□ -2.02
P04224 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.41□□□□□ -2.02
P04224 Gm46312-201ENSMUST00000220961 420 ntBASIC2.41□□□□□ -2.02
P04224 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.41□□□□□ -2.02
P04224 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
P04224 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
P04224 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
P04224 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.4□□□□□ -2.03
P04224 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
P04224 Gm22651-201ENSMUST00000157872 94 ntBASIC2.4□□□□□ -2.03
P04224 Gm24191-201ENSMUST00000157977 122 ntBASIC2.4□□□□□ -2.03
P04224 Gm23016-201ENSMUST00000158431 62 ntBASIC2.4□□□□□ -2.03
P04224 Snord11-201ENSMUST00000158468 84 ntBASIC2.4□□□□□ -2.03
P04224 Gm17148-201ENSMUST00000164702 249 ntBASIC2.4□□□□□ -2.03
P04224 Mir5112-201ENSMUST00000174897 60 ntBASIC2.4□□□□□ -2.03
P04224 Gm26501-201ENSMUST00000178307 107 ntBASIC2.4□□□□□ -2.03
P04224 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.4□□□□□ -2.03
P04224 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.4□□□□□ -2.03
P04224 Gm18971-201ENSMUST00000197240 374 ntBASIC2.4□□□□□ -2.03
P04224 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
P04224 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.4□□□□□ -2.03
P04224 Gm45375-201ENSMUST00000210338 280 ntBASIC2.4□□□□□ -2.03
P04224 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.4□□□□□ -2.03
P04224 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.4□□□□□ -2.03
P04224 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.4□□□□□ -2.03
P04224 Gm23246-201ENSMUST00000083371 67 ntBASIC2.4□□□□□ -2.03
P04224 Mir27a-201ENSMUST00000083510 87 ntBASIC2.4□□□□□ -2.03
P04224 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
P04224 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.4□□□□□ -2.03
P04224 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
P04224 Gm11386-201ENSMUST00000117761 347 ntBASIC2.39□□□□□ -2.03
P04224 Gm23331-201ENSMUST00000157423 108 ntBASIC2.39□□□□□ -2.03
P04224 Gm25384-201ENSMUST00000157807 105 ntBASIC2.39□□□□□ -2.03
P04224 Gm25977-201ENSMUST00000158697 85 ntBASIC2.39□□□□□ -2.03
P04224 Gm28927-201ENSMUST00000191528 272 ntBASIC2.39□□□□□ -2.03
P04224 Gm44060-201ENSMUST00000204440 410 ntBASIC2.39□□□□□ -2.03
P04224 Gm45513-201ENSMUST00000210228 376 ntBASIC2.39□□□□□ -2.03
P04224 Gm17990-201ENSMUST00000211728 553 ntBASIC2.39□□□□□ -2.03
P04224 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.39□□□□□ -2.03
P04224 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC2.39□□□□□ -2.03
P04224 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.39□□□□□ -2.03
P04224 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.39□□□□□ -2.03
P04224 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.39□□□□□ -2.03
P04224 CT010505.1-201ENSMUST00000227026 396 ntBASIC2.39□□□□□ -2.03
P04224 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
P04224 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.39□□□□□ -2.03
P04224 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.39□□□□□ -2.03
P04224 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
P04224 Snora36b-201ENSMUST00000104383 132 ntBASIC2.38□□□□□ -2.03
P04224 Gm14402-201ENSMUST00000122217 508 ntBASIC2.38□□□□□ -2.03
P04224 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.38□□□□□ -2.03
P04224 Gm23557-201ENSMUST00000157820 138 ntBASIC2.38□□□□□ -2.03
P04224 Gm21978-201ENSMUST00000179696 377 ntBASIC2.38□□□□□ -2.03
P04224 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
P04224 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.38□□□□□ -2.03
P04224 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.38□□□□□ -2.03
P04224 Gm42622-201ENSMUST00000197229 355 ntBASIC2.38□□□□□ -2.03
P04224 Gm43708-201ENSMUST00000198857 961 ntBASIC2.38□□□□□ -2.03
P04224 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
P04224 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.38□□□□□ -2.03
P04224 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.38□□□□□ -2.03
P04224 Gm20102-201ENSMUST00000222445 220 ntBASIC2.38□□□□□ -2.03
P04224 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
P04224 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.38□□□□□ -2.03
P04224 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
P04224 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
P04224 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
P04224 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.37□□□□□ -2.03
P04224 Gm11359-201ENSMUST00000120039 567 ntBASIC2.37□□□□□ -2.03
P04224 Gm12304-201ENSMUST00000120312 385 ntBASIC2.37□□□□□ -2.03
P04224 Gm13913-201ENSMUST00000121126 260 ntBASIC2.37□□□□□ -2.03
P04224 Gm13862-201ENSMUST00000121220 197 ntBASIC2.37□□□□□ -2.03
P04224 Gm14389-201ENSMUST00000140453 241 ntBASIC2.37□□□□□ -2.03
P04224 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.37□□□□□ -2.03
P04224 Gm24577-201ENSMUST00000158580 63 ntBASIC2.37□□□□□ -2.03
P04224 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
P04224 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.37□□□□□ -2.03
P04224 Gm28925-201ENSMUST00000188586 168 ntBASIC2.37□□□□□ -2.03
P04224 Gm28744-201ENSMUST00000189939 340 ntBASIC2.37□□□□□ -2.03
P04224 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
P04224 Gm43739-201ENSMUST00000198294 307 ntBASIC2.37□□□□□ -2.03
P04224 Gm18991-201ENSMUST00000209225 746 ntBASIC2.37□□□□□ -2.03
P04224 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.37□□□□□ -2.03
P04224 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.37□□□□□ -2.03
P04224 Gm25592-201ENSMUST00000082635 131 ntBASIC2.37□□□□□ -2.03
P04224 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
P04224 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
P04224 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
P04224 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
P04224 Gm12458-201ENSMUST00000119387 495 ntBASIC2.36□□□□□ -2.03
P04224 Gm15030-201ENSMUST00000119804 484 ntBASIC2.36□□□□□ -2.03
P04224 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.36□□□□□ -2.03
P04224 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
P04224 Gm23667-201ENSMUST00000157466 120 ntBASIC2.36□□□□□ -2.03
P04224 Gm25335-201ENSMUST00000158043 103 ntBASIC2.36□□□□□ -2.03
P04224 Gm27510-201ENSMUST00000158214 64 ntBASIC2.36□□□□□ -2.03
P04224 Gm24211-201ENSMUST00000158264 107 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 528 ms