Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm9059-201ENSMUST00000118319 183 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm13167-201ENSMUST00000118554 578 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm14307-201ENSMUST00000118930 291 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm14297-201ENSMUST00000129110 291 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm6956-201ENSMUST00000134724 546 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm23168-201ENSMUST00000157156 143 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm26186-201ENSMUST00000157689 125 ntBASIC3.31□□□□□ -1.88
Best1O88870 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Best1O88870 Gm22910-201ENSMUST00000178568 132 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm28288-201ENSMUST00000191019 214 ntBASIC3.31□□□□□ -1.88
Best1O88870 Mir3068-202ENSMUST00000197755 79 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm44084-201ENSMUST00000203947 409 ntBASIC3.31□□□□□ -1.88
Best1O88870 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm44600-201ENSMUST00000208540 111 ntBASIC3.31□□□□□ -1.88
Best1O88870 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.31□□□□□ -1.88
Best1O88870 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.31□□□□□ -1.88
Best1O88870 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.31□□□□□ -1.88
Best1O88870 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.31□□□□□ -1.88
Best1O88870 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.31□□□□□ -1.88
Best1O88870 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.3□□□□□ -1.88
Best1O88870 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Best1O88870 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Best1O88870 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Best1O88870 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Best1O88870 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.3□□□□□ -1.88
Best1O88870 Gm22956-201ENSMUST00000122520 80 ntBASIC3.3□□□□□ -1.88
Best1O88870 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.3□□□□□ -1.88
Best1O88870 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.3□□□□□ -1.88
Best1O88870 Gm22037-201ENSMUST00000157280 296 ntBASIC3.3□□□□□ -1.88
Best1O88870 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Best1O88870 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Best1O88870 Gm24819-201ENSMUST00000175094 166 ntBASIC3.3□□□□□ -1.88
Best1O88870 Gm5224-201ENSMUST00000183060 350 ntBASIC3.3□□□□□ -1.88
Best1O88870 Mir6715-201ENSMUST00000184990 57 ntBASIC3.3□□□□□ -1.88
Best1O88870 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.3□□□□□ -1.88
Best1O88870 Gm8940-201ENSMUST00000212585 219 ntBASIC3.3□□□□□ -1.88
Best1O88870 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.3□□□□□ -1.88
Best1O88870 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.3□□□□□ -1.88
Best1O88870 AF357341-201ENSMUST00000083088 75 ntBASIC3.3□□□□□ -1.88
Best1O88870 Gm24533-201ENSMUST00000083138 196 ntBASIC3.3□□□□□ -1.88
Best1O88870 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Best1O88870 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Best1O88870 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Best1O88870 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.29□□□□□ -1.88
Best1O88870 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Best1O88870 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Best1O88870 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Best1O88870 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
Best1O88870 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Best1O88870 Gm22115-201ENSMUST00000103976 133 ntBASIC3.29□□□□□ -1.88
Best1O88870 Gm23923-201ENSMUST00000104108 133 ntBASIC3.29□□□□□ -1.88
Best1O88870 Gm23202-201ENSMUST00000104376 129 ntBASIC3.29□□□□□ -1.88
Best1O88870 Gm14843-201ENSMUST00000119596 212 ntBASIC3.29□□□□□ -1.88
Best1O88870 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.29□□□□□ -1.88
Best1O88870 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.29□□□□□ -1.88
Best1O88870 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.29□□□□□ -1.88
Best1O88870 Gm24504-201ENSMUST00000157679 100 ntBASIC3.29□□□□□ -1.88
Best1O88870 Gm25454-201ENSMUST00000157947 315 ntBASIC3.29□□□□□ -1.88
Best1O88870 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.29□□□□□ -1.88
Best1O88870 Gm27374-201ENSMUST00000183660 81 ntBASIC3.29□□□□□ -1.88
Best1O88870 Gm6060-201ENSMUST00000188671 251 ntBASIC3.29□□□□□ -1.88
Best1O88870 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.29□□□□□ -1.88
Best1O88870 Gm32222-201ENSMUST00000203296 298 ntBASIC3.29□□□□□ -1.88
Best1O88870 Gm23412-201ENSMUST00000083017 107 ntBASIC3.29□□□□□ -1.88
Best1O88870 Snora31-201ENSMUST00000083213 130 ntBASIC3.29□□□□□ -1.88
Best1O88870 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.29□□□□□ -1.88
Best1O88870 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Best1O88870 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Best1O88870 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Best1O88870 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Best1O88870 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Best1O88870 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Best1O88870 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Best1O88870 Gm15010-201ENSMUST00000117153 407 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm14402-201ENSMUST00000122217 508 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm17100-201ENSMUST00000168963 272 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm27640-201ENSMUST00000184580 147 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm29397-201ENSMUST00000185205 333 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm28717-201ENSMUST00000189950 315 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm19777-201ENSMUST00000191940 358 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm44063-201ENSMUST00000203307 376 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.28□□□□□ -1.88
Best1O88870 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.28□□□□□ -1.88
Best1O88870 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Best1O88870 Gm22739-201ENSMUST00000083437 160 ntBASIC3.28□□□□□ -1.88
Best1O88870 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.28□□□□□ -1.88
Best1O88870 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Best1O88870 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Best1O88870 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Best1O88870 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Best1O88870 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.27□□□□□ -1.89
Best1O88870 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.27□□□□□ -1.89
Best1O88870 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Best1O88870 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Best1O88870 Gm13439-201ENSMUST00000117541 409 ntBASIC3.27□□□□□ -1.89
Best1O88870 Gm23791-201ENSMUST00000122553 293 ntBASIC3.27□□□□□ -1.89
Best1O88870 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms