Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ccdc9bA3KGF9 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc9bA3KGF9 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm14073-201ENSMUST00000117344 381 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm12550-201ENSMUST00000118478 329 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm13687-201ENSMUST00000119857 282 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm23277-201ENSMUST00000157914 136 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm25071-201ENSMUST00000175232 70 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm27753-201ENSMUST00000184742 203 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm36964-201ENSMUST00000191876 198 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm37050-201ENSMUST00000193464 466 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Snord80-202ENSMUST00000199023 77 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm25813-201ENSMUST00000082748 191 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm24950-201ENSMUST00000082768 191 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm23971-201ENSMUST00000083317 191 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm23849-201ENSMUST00000083833 191 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm26316-201ENSMUST00000083886 191 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc9bA3KGF9 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm14518-201ENSMUST00000117351 542 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm15180-201ENSMUST00000117745 492 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm24716-201ENSMUST00000157524 104 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm25369-201ENSMUST00000158848 132 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm25817-201ENSMUST00000177758 121 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm24766-201ENSMUST00000179182 121 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm29167-201ENSMUST00000190024 377 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm44354-201ENSMUST00000196017 143 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Mir7682-201ENSMUST00000198467 58 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm44524-201ENSMUST00000203899 271 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm45543-201ENSMUST00000209327 88 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm4036-201ENSMUST00000220842 626 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm25800-201ENSMUST00000082636 134 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm10360-201ENSMUST00000097219 272 ntBASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc9bA3KGF9 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm14020-201ENSMUST00000118165 662 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm12458-201ENSMUST00000119387 495 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm25177-201ENSMUST00000122634 117 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm25494-201ENSMUST00000158143 100 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm19244-201ENSMUST00000204340 253 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm44922-201ENSMUST00000206690 90 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gm45013-201ENSMUST00000206883 178 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Mir146-201ENSMUST00000083667 65 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc9bA3KGF9 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
Ccdc9bA3KGF9 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc9bA3KGF9 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms