Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 AC239878.2-201ENSMUST00000224048 464 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mir29c-201ENSMUST00000083614 88 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm13087-201ENSMUST00000118298 256 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm6956-201ENSMUST00000134724 546 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22611-201ENSMUST00000158288 150 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22944-201ENSMUST00000158662 133 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mir7683-201ENSMUST00000183842 61 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm18729-201ENSMUST00000217230 621 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 AC111046.1-201ENSMUST00000217715 412 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22997-201ENSMUST00000082845 107 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22265-201ENSMUST00000082947 116 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm24252-201ENSMUST00000083700 132 ntBASIC0.8□□□□□ -2.28
Trav9-4A0A0B4J1K2 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22091-201ENSMUST00000116908 127 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm13457-201ENSMUST00000117885 267 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm6923-201ENSMUST00000118343 406 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm11784-201ENSMUST00000118568 474 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm14915-201ENSMUST00000120747 204 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm12639-201ENSMUST00000121400 493 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mir1967-201ENSMUST00000157789 82 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm25768-201ENSMUST00000158570 98 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22074-201ENSMUST00000158595 113 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm21744-201ENSMUST00000178403 662 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm23714-201ENSMUST00000179259 105 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm26189-201ENSMUST00000179879 107 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm27419-201ENSMUST00000184576 109 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm29413-201ENSMUST00000186019 880 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28838-201ENSMUST00000186338 315 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm29635-201ENSMUST00000187221 315 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28700-201ENSMUST00000187614 579 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm29026-201ENSMUST00000187787 315 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm29639-201ENSMUST00000188375 580 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28797-201ENSMUST00000188543 315 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28855-201ENSMUST00000188680 315 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28843-201ENSMUST00000189198 678 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28705-201ENSMUST00000189548 315 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28939-201ENSMUST00000190351 315 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28223-201ENSMUST00000190469 315 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm29092-201ENSMUST00000190768 315 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm29546-201ENSMUST00000191171 678 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm37743-201ENSMUST00000194645 376 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 AC167202.1-201ENSMUST00000219027 331 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22061-201ENSMUST00000082557 107 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 BC022960-201ENSMUST00000119987 1815 ntBASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm11065-201ENSMUST00000111462 228 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm14594-201ENSMUST00000118052 537 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm14590-201ENSMUST00000118934 537 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm15193-201ENSMUST00000120224 865 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm12372-201ENSMUST00000121654 768 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm14530-201ENSMUST00000122391 333 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22452-201ENSMUST00000122804 104 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm24154-201ENSMUST00000175261 130 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm24100-201ENSMUST00000178592 79 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm14596-201ENSMUST00000180268 537 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm14595-201ENSMUST00000180335 537 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mir22-201ENSMUST00000083595 95 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.78□□□□□ -2.28
Trav9-4A0A0B4J1K2 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.29
Trav9-4A0A0B4J1K2 AC153964.2-201ENSMUST00000217704 2474 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm22779-201ENSMUST00000104085 107 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm15714-201ENSMUST00000117168 250 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm11785-201ENSMUST00000120165 601 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm22338-201ENSMUST00000157715 129 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm26365-201ENSMUST00000179177 94 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm29460-201ENSMUST00000188607 714 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm44324-201ENSMUST00000198517 135 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 Gm45207-201ENSMUST00000207469 145 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.77□□□□□ -2.29
Trav9-4A0A0B4J1K2 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms