Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Mir127-201ENSMUST00000093568 70 ntBASIC1.4□□□□□ -2.19
Trav11A0A0B4J1J9 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.4□□□□□ -2.19
Trav11A0A0B4J1J9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trav11A0A0B4J1J9 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm13728-201ENSMUST00000117471 400 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm23889-201ENSMUST00000122689 104 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm25808-201ENSMUST00000122784 284 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm25012-201ENSMUST00000158396 164 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm7953-201ENSMUST00000168278 469 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm22192-201ENSMUST00000175128 85 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm24168-201ENSMUST00000178825 107 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm25457-201ENSMUST00000179509 107 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm27659-201ENSMUST00000183472 98 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Mir7016-201ENSMUST00000184308 72 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Mir7047-201ENSMUST00000184595 64 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm37361-201ENSMUST00000194345 132 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm18774-201ENSMUST00000218269 601 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm22062-201ENSMUST00000082563 107 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm25632-201ENSMUST00000083112 85 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm24045-201ENSMUST00000083113 98 ntBASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Trav11A0A0B4J1J9 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm12598-201ENSMUST00000117333 830 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm24517-201ENSMUST00000122560 107 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm24237-201ENSMUST00000157790 132 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm23342-201ENSMUST00000158958 115 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Mir3086-201ENSMUST00000175072 87 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm24816-201ENSMUST00000175311 151 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm21894-201ENSMUST00000179631 546 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm23862-201ENSMUST00000180342 94 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm44393-201ENSMUST00000197418 138 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm43680-201ENSMUST00000199466 340 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Mir10a-201ENSMUST00000083585 110 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm24490-201ENSMUST00000083803 98 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 AC167192.3-201ENSMUST00000224096 1567 ntBASIC1.38□□□□□ -2.19
Trav11A0A0B4J1J9 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm22831-201ENSMUST00000102473 109 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm24122-201ENSMUST00000104107 132 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Mir3096-201ENSMUST00000116685 71 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm14007-201ENSMUST00000118288 210 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm14709-201ENSMUST00000121225 304 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm14638-201ENSMUST00000121338 216 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm25625-201ENSMUST00000157221 96 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm23829-201ENSMUST00000157392 270 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm24075-201ENSMUST00000158175 72 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm22159-201ENSMUST00000158412 130 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm24768-201ENSMUST00000158512 94 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm24573-201ENSMUST00000175499 112 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm9022-202ENSMUST00000183285 483 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm27369-201ENSMUST00000185182 71 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm18775-201ENSMUST00000190763 586 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm37377-201ENSMUST00000191733 304 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm31230-201ENSMUST00000199725 785 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Mir497-201ENSMUST00000200557 84 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm44212-201ENSMUST00000205016 897 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm26126-201ENSMUST00000083188 164 ntBASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trav11A0A0B4J1J9 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.36□□□□□ -2.19
Trav11A0A0B4J1J9 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.36□□□□□ -2.19
Trav11A0A0B4J1J9 Gm25407-201ENSMUST00000104102 134 ntBASIC1.36□□□□□ -2.19
Trav11A0A0B4J1J9 Mir873a-201ENSMUST00000104863 77 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms