Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 AC140344.1-201ENSMUST00000223384 387 ntBASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 Gnrh1-202ENSMUST00000223929 428 ntBASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 AC156790.5-201ENSMUST00000227075 231 ntBASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm24172-201ENSMUST00000104127 117 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm24338-201ENSMUST00000104205 127 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Snora36b-201ENSMUST00000104383 132 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm22678-201ENSMUST00000116974 101 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm14579-201ENSMUST00000117068 283 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm15038-201ENSMUST00000122144 296 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm24443-201ENSMUST00000157242 132 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm25054-201ENSMUST00000157370 97 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm22554-201ENSMUST00000157798 147 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm24436-201ENSMUST00000157889 302 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm24053-201ENSMUST00000158620 105 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm29134-201ENSMUST00000186579 126 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm28337-201ENSMUST00000190425 666 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm37557-201ENSMUST00000191640 139 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm44726-201ENSMUST00000203427 217 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm44794-201ENSMUST00000206550 411 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 AC124562.1-201ENSMUST00000224673 337 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm24533-201ENSMUST00000083138 196 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm22656-201ENSMUST00000104199 171 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm11386-201ENSMUST00000117761 347 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm12646-201ENSMUST00000119144 238 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm23791-201ENSMUST00000122553 293 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm24475-201ENSMUST00000157435 143 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm22651-201ENSMUST00000157872 94 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm22654-201ENSMUST00000157874 105 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm25012-201ENSMUST00000158396 164 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm20718-201ENSMUST00000176058 259 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Mir6911-201ENSMUST00000184241 69 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm18346-201ENSMUST00000216782 325 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm23462-201ENSMUST00000083264 104 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Mir93-201ENSMUST00000083593 88 ntBASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trbv3A0A0A6YYE2 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm22782-201ENSMUST00000104082 132 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm25169-201ENSMUST00000104190 129 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm15010-201ENSMUST00000117153 407 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm14624-201ENSMUST00000117746 192 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm13457-201ENSMUST00000117885 267 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm12617-201ENSMUST00000121268 381 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm25888-201ENSMUST00000157778 302 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm22136-201ENSMUST00000158751 268 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm24084-201ENSMUST00000175173 137 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm26430-201ENSMUST00000178054 107 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm27588-201ENSMUST00000185096 263 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm28489-201ENSMUST00000186655 316 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm17951-201ENSMUST00000198536 496 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm45315-201ENSMUST00000209283 333 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm7214-201ENSMUST00000222428 272 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm22062-201ENSMUST00000082563 107 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm23453-201ENSMUST00000083326 106 ntBASIC2.11□□□□□ -2.07
Trbv3A0A0A6YYE2 Gm25651-201ENSMUST00000083782 119 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms