Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm18729-201ENSMUST00000217230 621 ntBASIC0.82□□□□□ -2.28
Trav9-1A0A075B601 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.82□□□□□ -2.28
Trav9-1A0A075B601 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC0.82□□□□□ -2.28
Trav9-1A0A075B601 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.82□□□□□ -2.28
Trav9-1A0A075B601 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.82□□□□□ -2.28
Trav9-1A0A075B601 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.82□□□□□ -2.28
Trav9-1A0A075B601 Gm22997-201ENSMUST00000082845 107 ntBASIC0.82□□□□□ -2.28
Trav9-1A0A075B601 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.82□□□□□ -2.28
Trav9-1A0A075B601 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm11065-201ENSMUST00000111462 228 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Mir1967-201ENSMUST00000157789 82 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm22099-201ENSMUST00000157925 123 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm22537-201ENSMUST00000158172 199 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm26029-201ENSMUST00000158659 132 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Traj60-201ENSMUST00000167781 54 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm25243-201ENSMUST00000174912 207 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm26365-201ENSMUST00000179177 94 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm38167-201ENSMUST00000195704 1178 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 AC239878.2-201ENSMUST00000224048 464 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 AC154603.1-201ENSMUST00000224355 313 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm23245-201ENSMUST00000083370 135 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Mir22-201ENSMUST00000083595 95 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm44114-201ENSMUST00000203270 2727 ntBASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Trav9-1A0A075B601 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm22780-201ENSMUST00000104084 132 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm14594-201ENSMUST00000118052 537 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm6923-201ENSMUST00000118343 406 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm14358-201ENSMUST00000118458 403 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm14590-201ENSMUST00000118934 537 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm11575-201ENSMUST00000122243 228 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm22768-201ENSMUST00000158366 153 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm25365-201ENSMUST00000158852 121 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm18397-201ENSMUST00000176704 587 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm22392-201ENSMUST00000177971 107 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm24100-201ENSMUST00000178592 79 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm6660-201ENSMUST00000179149 468 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm14596-201ENSMUST00000180268 537 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm24969-201ENSMUST00000180331 79 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm14595-201ENSMUST00000180335 537 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm28794-201ENSMUST00000185276 136 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm37743-201ENSMUST00000194645 376 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm45207-201ENSMUST00000207469 145 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm45268-201ENSMUST00000210046 370 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Gm9068-201ENSMUST00000217393 455 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.8□□□□□ -2.28
Trav9-1A0A075B601 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm24582-201ENSMUST00000103967 103 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm23011-201ENSMUST00000104148 132 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm6664-201ENSMUST00000119138 468 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm14366-201ENSMUST00000121970 730 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 n-R5s15-201ENSMUST00000122635 111 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm22452-201ENSMUST00000122804 104 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm22136-201ENSMUST00000158751 268 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm25020-201ENSMUST00000178071 107 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm44324-201ENSMUST00000198517 135 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 AC154552.5-201ENSMUST00000222352 207 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 AC151902.1-201ENSMUST00000227800 375 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Ear14-201ENSMUST00000049559 468 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm22061-201ENSMUST00000082557 107 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm26493-201ENSMUST00000083155 136 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm23452-201ENSMUST00000083327 107 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 Gm23058-201ENSMUST00000093703 107 ntBASIC0.79□□□□□ -2.28
Trav9-1A0A075B601 BC022960-201ENSMUST00000119987 1815 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Gm11784-201ENSMUST00000118568 474 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Gm26487-201ENSMUST00000158022 94 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Gm24773-201ENSMUST00000158513 99 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Gm20415-201ENSMUST00000172877 423 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Gm27898-201ENSMUST00000183987 80 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Gm27517-201ENSMUST00000184347 236 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Gm28437-201ENSMUST00000190277 783 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 AC116726.2-201ENSMUST00000217629 986 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Gm30738-201ENSMUST00000221346 502 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 AC154552.4-201ENSMUST00000222171 151 ntBASIC0.78□□□□□ -2.28
Trav9-1A0A075B601 Gm21937-201ENSMUST00000222825 218 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms