Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm18015-201ENSMUST00000214879 316 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm10298-201ENSMUST00000074801 265 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm26454-201ENSMUST00000082682 107 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Mir384-201ENSMUST00000083565 88 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm43404-201ENSMUST00000200424 2534 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm22472-201ENSMUST00000104115 134 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm23319-201ENSMUST00000104467 131 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm12550-201ENSMUST00000118478 329 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm22613-201ENSMUST00000122679 292 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm24666-201ENSMUST00000158937 167 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 AC124182.1-201ENSMUST00000227091 321 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm25813-201ENSMUST00000082748 191 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm24950-201ENSMUST00000082768 191 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm23971-201ENSMUST00000083317 191 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm23849-201ENSMUST00000083833 191 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm26316-201ENSMUST00000083886 191 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Prpf40aQ9R1C7 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm24125-201ENSMUST00000104105 137 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm14073-201ENSMUST00000117344 381 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm12884-201ENSMUST00000120371 325 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm25107-201ENSMUST00000122472 129 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm25071-201ENSMUST00000175232 70 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Snord80-202ENSMUST00000199023 77 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm44429-201ENSMUST00000203542 186 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm35405-201ENSMUST00000218754 400 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm9174-201ENSMUST00000078149 255 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Gm26449-201ENSMUST00000082452 104 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Snord22-201ENSMUST00000083153 126 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Prpf40aQ9R1C7 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm37061-201ENSMUST00000195066 3243 ntBASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm23905-201ENSMUST00000157568 109 ntBASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm19898-201ENSMUST00000177490 251 ntBASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Mir6996-201ENSMUST00000183922 61 ntBASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm44922-201ENSMUST00000206690 90 ntBASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 AC192091.2-201ENSMUST00000217869 117 ntBASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Mir146-201ENSMUST00000083667 65 ntBASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Gm10360-201ENSMUST00000097219 272 ntBASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.47□□□□□ -1.69
Prpf40aQ9R1C7 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Prpf40aQ9R1C7 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
Prpf40aQ9R1C7 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
Prpf40aQ9R1C7 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.46□□□□□ -1.69
Prpf40aQ9R1C7 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Prpf40aQ9R1C7 Gm22488-201ENSMUST00000116811 127 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm13868-201ENSMUST00000122411 294 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm16250-201ENSMUST00000148974 256 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm25965-201ENSMUST00000157170 93 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm25494-201ENSMUST00000158143 100 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm26036-201ENSMUST00000158149 144 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm16289-201ENSMUST00000162079 183 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms