Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.82□□□□□ -2.12
Trem1Q9JKE2 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Trem1Q9JKE2 Gm22620-201ENSMUST00000082700 133 ntBASIC1.82□□□□□ -2.12
Trem1Q9JKE2 Gm24165-201ENSMUST00000082718 128 ntBASIC1.82□□□□□ -2.12
Trem1Q9JKE2 Gm26328-201ENSMUST00000082821 107 ntBASIC1.82□□□□□ -2.12
Trem1Q9JKE2 Gm22229-201ENSMUST00000082987 108 ntBASIC1.82□□□□□ -2.12
Trem1Q9JKE2 Gm25794-201ENSMUST00000083286 107 ntBASIC1.82□□□□□ -2.12
Trem1Q9JKE2 Gm24490-201ENSMUST00000083803 98 ntBASIC1.82□□□□□ -2.12
Trem1Q9JKE2 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Trem1Q9JKE2 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trem1Q9JKE2 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm14887-201ENSMUST00000119522 663 ntBASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm23111-201ENSMUST00000122652 105 ntBASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm25888-201ENSMUST00000157778 302 ntBASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm18775-201ENSMUST00000190763 586 ntBASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm37361-201ENSMUST00000194345 132 ntBASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm43510-201ENSMUST00000197922 353 ntBASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm43680-201ENSMUST00000199466 340 ntBASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm44564-201ENSMUST00000207985 180 ntBASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm20304-201ENSMUST00000218168 444 ntBASIC1.81□□□□□ -2.12
Trem1Q9JKE2 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trem1Q9JKE2 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Gm24122-201ENSMUST00000104107 132 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Mir873a-201ENSMUST00000104863 77 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Gm22603-201ENSMUST00000157603 96 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Gm26173-201ENSMUST00000158416 136 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Gm22668-201ENSMUST00000158716 260 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Gm24168-201ENSMUST00000178825 107 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Mir7013-201ENSMUST00000183540 72 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Gm29452-201ENSMUST00000187996 313 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Gm28860-201ENSMUST00000188103 313 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Mir497-201ENSMUST00000200557 84 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.8□□□□□ -2.12
Trem1Q9JKE2 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Gm5374-201ENSMUST00000222868 657 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Gm23503-201ENSMUST00000083903 107 ntBASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trem1Q9JKE2 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Trem1Q9JKE2 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Gm22674-201ENSMUST00000104413 131 ntBASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Gm9043-201ENSMUST00000119677 314 ntBASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Gm22093-201ENSMUST00000158980 111 ntBASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Gm28917-201ENSMUST00000187294 237 ntBASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Gm28766-201ENSMUST00000191086 234 ntBASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Gm44083-201ENSMUST00000203114 337 ntBASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Gm32222-201ENSMUST00000203296 298 ntBASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trem1Q9JKE2 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trem1Q9JKE2 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm13728-201ENSMUST00000117471 400 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm13368-201ENSMUST00000122443 430 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm23981-201ENSMUST00000157136 106 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm22534-201ENSMUST00000158173 104 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm24922-201ENSMUST00000158511 102 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm24333-201ENSMUST00000175101 84 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm23402-201ENSMUST00000178130 107 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm22633-201ENSMUST00000179834 107 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm27659-201ENSMUST00000183472 98 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm18403-201ENSMUST00000192907 529 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm18774-201ENSMUST00000218269 601 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm22249-201ENSMUST00000082485 136 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Gm25813-201ENSMUST00000082748 191 ntBASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trem1Q9JKE2 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.13
Trem1Q9JKE2 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm25407-201ENSMUST00000104102 134 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm14713-201ENSMUST00000122362 686 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm22597-201ENSMUST00000157602 80 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm24997-201ENSMUST00000157910 105 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm22517-201ENSMUST00000158265 136 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm24222-201ENSMUST00000158834 93 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm23005-201ENSMUST00000158950 136 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Mir28b-201ENSMUST00000175399 80 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm25670-201ENSMUST00000178423 107 ntBASIC1.77□□□□□ -2.13
Trem1Q9JKE2 Gm23269-201ENSMUST00000178701 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms