Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm25981-201ENSMUST00000157921 295 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm25836-201ENSMUST00000158918 123 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm27493-201ENSMUST00000184128 78 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm38154-201ENSMUST00000195444 340 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm42647-201ENSMUST00000195939 459 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm44483-201ENSMUST00000197203 97 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm44128-201ENSMUST00000204909 219 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm9377-201ENSMUST00000207227 623 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm44961-201ENSMUST00000207450 196 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm45101-201ENSMUST00000208327 232 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm7984-201ENSMUST00000060640 538 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm24254-201ENSMUST00000083702 104 ntBASIC1.09□□□□□ -2.23
Trem3Q9JKE1 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.09□□□□□ -2.24
Trem3Q9JKE1 Gm14879-201ENSMUST00000117308 507 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm13378-201ENSMUST00000117483 336 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm11845-201ENSMUST00000117886 327 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm14785-201ENSMUST00000120185 539 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm23713-201ENSMUST00000157353 70 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm23754-201ENSMUST00000157576 63 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm26414-201ENSMUST00000157674 269 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm22615-201ENSMUST00000158102 70 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm25958-201ENSMUST00000175114 71 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm25730-201ENSMUST00000178753 165 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm27245-201ENSMUST00000184385 376 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm45912-201ENSMUST00000210646 543 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm45240-201ENSMUST00000211437 674 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm19709-201ENSMUST00000215403 482 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm22723-201ENSMUST00000083820 129 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.08□□□□□ -2.24
Trem3Q9JKE1 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Mir883a-201ENSMUST00000104824 76 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Gm15714-201ENSMUST00000117168 250 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Gm15878-201ENSMUST00000127561 306 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Gm16129-201ENSMUST00000152628 486 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Gm15279-201ENSMUST00000155593 288 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Gm24394-201ENSMUST00000158141 123 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Gm24677-201ENSMUST00000158755 150 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Gm27588-201ENSMUST00000185096 263 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.07□□□□□ -2.24
Trem3Q9JKE1 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Gm13885-201ENSMUST00000117569 187 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Gm11857-201ENSMUST00000119817 324 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Gm14215-201ENSMUST00000120578 221 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Gm14530-201ENSMUST00000122391 333 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Gm25243-201ENSMUST00000174912 207 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Gm25020-201ENSMUST00000178071 107 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Platr25-208ENSMUST00000222602 939 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 AL645546.2-201ENSMUST00000224526 265 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trem3Q9JKE1 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Mir653-201ENSMUST00000102402 85 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm24865-201ENSMUST00000103246 96 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm25495-201ENSMUST00000104431 131 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm6025-201ENSMUST00000121517 201 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm23122-201ENSMUST00000157645 103 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm25888-201ENSMUST00000157778 302 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm27676-201ENSMUST00000183669 61 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Mir7683-201ENSMUST00000183842 61 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm29600-201ENSMUST00000188687 377 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Mir3068-202ENSMUST00000197755 79 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm43512-201ENSMUST00000198495 176 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm43026-201ENSMUST00000202972 325 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm45654-201ENSMUST00000210980 123 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC1.05□□□□□ -2.24
Trem3Q9JKE1 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.05□□□□□ -2.24
Trem3Q9JKE1 Gm23741-201ENSMUST00000097237 171 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms