Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm26317-201ENSMUST00000083894 107 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm22352-201ENSMUST00000083917 107 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm24448-201ENSMUST00000083979 107 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm22798-201ENSMUST00000083992 107 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm26427-201ENSMUST00000093648 107 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm22886-201ENSMUST00000093714 107 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm22170-201ENSMUST00000097247 107 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.14□□□□□ -1.91
Trim54Q9ERP3 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trim54Q9ERP3 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm25466-201ENSMUST00000103995 132 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm14448-201ENSMUST00000116383 210 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm13806-201ENSMUST00000117822 325 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm23184-201ENSMUST00000122594 131 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm25280-201ENSMUST00000157269 101 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm24857-201ENSMUST00000158061 310 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm24885-201ENSMUST00000158783 270 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm7925-201ENSMUST00000166690 401 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm23268-201ENSMUST00000175494 78 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Mir5123-201ENSMUST00000177794 83 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm22131-201ENSMUST00000178415 94 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm26585-201ENSMUST00000180890 630 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm37417-201ENSMUST00000195257 454 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm18341-201ENSMUST00000197538 622 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm43976-201ENSMUST00000203637 235 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm44526-201ENSMUST00000204664 121 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm44687-201ENSMUST00000204975 235 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm23723-201ENSMUST00000082996 132 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Gm25207-201ENSMUST00000093745 107 ntBASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trim54Q9ERP3 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm22779-201ENSMUST00000104085 107 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm16242-201ENSMUST00000117741 334 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm14940-201ENSMUST00000119309 495 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm22026-201ENSMUST00000122735 281 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm23325-201ENSMUST00000157422 129 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm23024-201ENSMUST00000158770 292 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm24757-201ENSMUST00000176987 371 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm26501-201ENSMUST00000178307 107 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm9402-201ENSMUST00000196849 388 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm44157-201ENSMUST00000204720 410 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm45395-201ENSMUST00000209891 559 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm10025-201ENSMUST00000079568 372 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim54Q9ERP3 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm13876-201ENSMUST00000118451 261 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm11356-201ENSMUST00000118974 192 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm22791-201ENSMUST00000157232 145 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm23557-201ENSMUST00000157820 138 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm22328-201ENSMUST00000158074 112 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm25528-201ENSMUST00000180264 132 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm43521-201ENSMUST00000197838 255 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm43107-201ENSMUST00000198729 255 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm45119-201ENSMUST00000207612 199 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm18453-201ENSMUST00000208000 626 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm18000-201ENSMUST00000212153 800 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Gm2436-201ENSMUST00000219562 774 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim54Q9ERP3 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim54Q9ERP3 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Mir499-201ENSMUST00000102357 79 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Mir344c-201ENSMUST00000103919 92 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm24122-201ENSMUST00000104107 132 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm14971-201ENSMUST00000117980 663 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm11819-201ENSMUST00000122192 372 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Trim54Q9ERP3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm22491-201ENSMUST00000157190 102 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm27510-201ENSMUST00000158214 64 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm24499-201ENSMUST00000158446 104 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Gm16232-201ENSMUST00000162856 167 ntBASIC3.1□□□□□ -1.91
Trim54Q9ERP3 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms