Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm28939-201ENSMUST00000190351 315 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm28223-201ENSMUST00000190469 315 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm29092-201ENSMUST00000190768 315 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm18964-201ENSMUST00000193013 563 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm43114-201ENSMUST00000198298 343 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm44990-201ENSMUST00000203922 217 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm23650-201ENSMUST00000083355 70 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Mir196b-201ENSMUST00000083509 85 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Scn4aQ9ER60 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Mir190b-201ENSMUST00000104803 80 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm14751-201ENSMUST00000117693 222 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm13356-201ENSMUST00000121678 335 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm8207-201ENSMUST00000171204 502 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm25451-201ENSMUST00000177832 121 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm28956-201ENSMUST00000189047 427 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm19202-201ENSMUST00000198096 808 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm43810-201ENSMUST00000201018 232 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm44135-201ENSMUST00000205221 368 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm45232-201ENSMUST00000207811 162 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Gm45522-201ENSMUST00000210784 166 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 AC091260.1-201ENSMUST00000216112 229 ntBASIC2.39□□□□□ -2.03
Scn4aQ9ER60 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Scn4aQ9ER60 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm23744-201ENSMUST00000104231 149 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm25787-201ENSMUST00000104709 92 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm26424-201ENSMUST00000122530 104 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm22098-201ENSMUST00000157930 85 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm17065-201ENSMUST00000165245 239 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Mir6402-201ENSMUST00000183406 80 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm35212-201ENSMUST00000196672 606 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.38□□□□□ -2.03
Scn4aQ9ER60 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm23741-201ENSMUST00000097237 171 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm25414-201ENSMUST00000101814 107 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm11389-201ENSMUST00000121407 430 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm23068-201ENSMUST00000158239 293 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm21758-201ENSMUST00000179336 819 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm29647-201ENSMUST00000188795 666 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm20832-201ENSMUST00000189076 665 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm28241-201ENSMUST00000190916 235 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm28504-201ENSMUST00000190977 666 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm31511-201ENSMUST00000193134 657 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm35843-201ENSMUST00000193716 666 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm30638-201ENSMUST00000195570 656 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm36728-201ENSMUST00000195782 665 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm42164-201ENSMUST00000198881 379 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Gm34701-202ENSMUST00000204685 360 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn4aQ9ER60 Mir463-201ENSMUST00000093570 75 ntBASIC2.38□□□□□ -2.03
Scn4aQ9ER60 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm14594-201ENSMUST00000118052 537 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm14590-201ENSMUST00000118934 537 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm15106-201ENSMUST00000119691 821 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm25784-201ENSMUST00000122524 81 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm24306-201ENSMUST00000180229 79 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm14596-201ENSMUST00000180268 537 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm14595-201ENSMUST00000180335 537 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Mir496b-201ENSMUST00000184935 113 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm29604-201ENSMUST00000187176 163 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm37599-201ENSMUST00000193067 489 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.37□□□□□ -2.03
Scn4aQ9ER60 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Scn4aQ9ER60 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Gm23645-201ENSMUST00000083228 108 ntBASIC2.37□□□□□ -2.03
Scn4aQ9ER60 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Scn4aQ9ER60 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.36□□□□□ -2.03
Scn4aQ9ER60 Gm14428-201ENSMUST00000120408 822 ntBASIC2.36□□□□□ -2.03
Scn4aQ9ER60 Gm22597-201ENSMUST00000157602 80 ntBASIC2.36□□□□□ -2.03
Scn4aQ9ER60 Gm24518-201ENSMUST00000180275 94 ntBASIC2.36□□□□□ -2.03
Scn4aQ9ER60 Gm29658-201ENSMUST00000185404 230 ntBASIC2.36□□□□□ -2.03
Scn4aQ9ER60 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.36□□□□□ -2.03
Scn4aQ9ER60 Gm19563-201ENSMUST00000222031 270 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms