Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm29192-201ENSMUST00000190942 377 ntBASIC0.75□□□□□ -2.29
Cpsf1Q9EPU4 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.75□□□□□ -2.29
Cpsf1Q9EPU4 Gm31511-201ENSMUST00000193134 657 ntBASIC0.75□□□□□ -2.29
Cpsf1Q9EPU4 AC105958.2-201ENSMUST00000214167 191 ntBASIC0.75□□□□□ -2.29
Cpsf1Q9EPU4 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.75□□□□□ -2.29
Cpsf1Q9EPU4 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC0.75□□□□□ -2.29
Cpsf1Q9EPU4 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Cpsf1Q9EPU4 Gm22302-201ENSMUST00000082657 106 ntBASIC0.75□□□□□ -2.29
Cpsf1Q9EPU4 n-R5s189-201ENSMUST00000122675 114 ntBASIC0.74□□□□□ -2.29
Cpsf1Q9EPU4 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.74□□□□□ -2.29
Cpsf1Q9EPU4 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.74□□□□□ -2.29
Cpsf1Q9EPU4 Mir6399-201ENSMUST00000184050 84 ntBASIC0.74□□□□□ -2.29
Cpsf1Q9EPU4 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.74□□□□□ -2.29
Cpsf1Q9EPU4 Gm37219-201ENSMUST00000192036 926 ntBASIC0.74□□□□□ -2.29
Cpsf1Q9EPU4 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.74□□□□□ -2.29
Cpsf1Q9EPU4 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Cpsf1Q9EPU4 Snord32a-201ENSMUST00000083285 83 ntBASIC0.74□□□□□ -2.29
Cpsf1Q9EPU4 Mir216a-201ENSMUST00000083605 72 ntBASIC0.74□□□□□ -2.29
Cpsf1Q9EPU4 Gm12096-201ENSMUST00000121149 829 ntBASIC0.73□□□□□ -2.29
Cpsf1Q9EPU4 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC0.73□□□□□ -2.29
Cpsf1Q9EPU4 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Cpsf1Q9EPU4 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Cpsf1Q9EPU4 Mir6374-201ENSMUST00000184003 107 ntBASIC0.73□□□□□ -2.29
Cpsf1Q9EPU4 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Cpsf1Q9EPU4 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Cpsf1Q9EPU4 Mir669f-201ENSMUST00000103850 121 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm13678-201ENSMUST00000118926 340 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm14840-201ENSMUST00000122135 594 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm22515-201ENSMUST00000158273 305 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Snord87-201ENSMUST00000175437 87 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm45689-201ENSMUST00000210522 133 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm26213-201ENSMUST00000158582 110 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm26157-201ENSMUST00000158974 126 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm37337-201ENSMUST00000192601 993 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm23517-201ENSMUST00000082830 192 ntBASIC0.72□□□□□ -2.29
Cpsf1Q9EPU4 Gm14910-201ENSMUST00000121037 1805 ntBASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 Mir1197-201ENSMUST00000117037 120 ntBASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 Gm6956-201ENSMUST00000134724 546 ntBASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 Gm23278-201ENSMUST00000157911 143 ntBASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 Traj60-201ENSMUST00000167781 54 ntBASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 AC154296.1-201ENSMUST00000198150 67 ntBASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 Gm45616-201ENSMUST00000211711 319 ntBASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 AC101945.3-201ENSMUST00000226568 153 ntBASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.71□□□□□ -2.3
Cpsf1Q9EPU4 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 Gm12313-201ENSMUST00000121347 421 ntBASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 Gm23672-201ENSMUST00000157471 107 ntBASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 Gm9541-201ENSMUST00000188409 502 ntBASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 Gm29740-201ENSMUST00000193182 655 ntBASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 Mir1291-201ENSMUST00000199842 117 ntBASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 Gm23100-201ENSMUST00000083455 141 ntBASIC0.7□□□□□ -2.3
Cpsf1Q9EPU4 Gm6272-201ENSMUST00000121256 171 ntBASIC0.69□□□□□ -2.3
Cpsf1Q9EPU4 Gm11389-201ENSMUST00000121407 430 ntBASIC0.69□□□□□ -2.3
Cpsf1Q9EPU4 Mir6389-201ENSMUST00000183661 102 ntBASIC0.69□□□□□ -2.3
Cpsf1Q9EPU4 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.69□□□□□ -2.3
Cpsf1Q9EPU4 Gm44465-201ENSMUST00000199536 114 ntBASIC0.69□□□□□ -2.3
Cpsf1Q9EPU4 Gm24208-201ENSMUST00000082783 135 ntBASIC0.69□□□□□ -2.3
Cpsf1Q9EPU4 Snord118-201ENSMUST00000082965 135 ntBASIC0.69□□□□□ -2.3
Cpsf1Q9EPU4 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.69□□□□□ -2.3
Cpsf1Q9EPU4 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
Cpsf1Q9EPU4 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Cpsf1Q9EPU4 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.68□□□□□ -2.3
Cpsf1Q9EPU4 Gm23897-201ENSMUST00000158110 158 ntBASIC0.68□□□□□ -2.3
Cpsf1Q9EPU4 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Cpsf1Q9EPU4 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC0.68□□□□□ -2.3
Cpsf1Q9EPU4 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC0.68□□□□□ -2.3
Cpsf1Q9EPU4 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC0.68□□□□□ -2.3
Cpsf1Q9EPU4 Gm21089-201ENSMUST00000215843 325 ntBASIC0.68□□□□□ -2.3
Cpsf1Q9EPU4 Gm25560-201ENSMUST00000104606 176 ntBASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 Gm13046-201ENSMUST00000117391 501 ntBASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 Gm11429-201ENSMUST00000119089 144 ntBASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 Gm14915-201ENSMUST00000120747 204 ntBASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 Gm7953-201ENSMUST00000168278 469 ntBASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 Gm22131-201ENSMUST00000178415 94 ntBASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 Gm29492-201ENSMUST00000187124 457 ntBASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 Gm45366-201ENSMUST00000209828 384 ntBASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 CT030687.1-201ENSMUST00000221854 162 ntBASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Cpsf1Q9EPU4 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.66□□□□□ -2.3
Cpsf1Q9EPU4 Gm23994-201ENSMUST00000158059 88 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms