Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Mir1942-201ENSMUST00000157274 63 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm22516-201ENSMUST00000158266 124 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm24348-201ENSMUST00000158710 130 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm5967-201ENSMUST00000172723 494 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm1833-201ENSMUST00000191608 682 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm37361-201ENSMUST00000194345 132 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm43586-201ENSMUST00000195948 310 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm45150-201ENSMUST00000206051 467 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm43404-201ENSMUST00000200424 2534 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm14518-201ENSMUST00000117351 542 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm26275-201ENSMUST00000157101 268 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm24358-201ENSMUST00000158424 288 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm16303-201ENSMUST00000161498 390 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm20450-201ENSMUST00000173652 147 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm23053-201ENSMUST00000175136 96 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm28000-201ENSMUST00000184380 85 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Mir6481-201ENSMUST00000184617 110 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm20257-202ENSMUST00000188643 130 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm29097-201ENSMUST00000190273 422 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm43250-201ENSMUST00000196536 273 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm22571-201ENSMUST00000082984 70 ntBASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Upf1Q9EPU0 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm14811-201ENSMUST00000117070 117 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm23586-201ENSMUST00000157657 123 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm23641-201ENSMUST00000157857 101 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Snora15-201ENSMUST00000177461 131 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm37698-201ENSMUST00000192605 463 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm19244-201ENSMUST00000204340 253 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm44853-201ENSMUST00000209070 250 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 AC160550.3-201ENSMUST00000226818 400 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm10088-201ENSMUST00000074116 423 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm22358-201ENSMUST00000082877 122 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm25188-201ENSMUST00000083913 122 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Upf1Q9EPU0 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm11065-201ENSMUST00000111462 228 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm13650-201ENSMUST00000117729 433 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm15211-201ENSMUST00000118932 528 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm13581-201ENSMUST00000120675 278 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm13424-201ENSMUST00000122301 354 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm15212-201ENSMUST00000122403 466 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm23258-201ENSMUST00000158319 106 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm22859-201ENSMUST00000174978 122 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm6660-201ENSMUST00000179149 468 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm37763-201ENSMUST00000193445 120 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Mir7661-201ENSMUST00000197023 61 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm44010-201ENSMUST00000204432 331 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm44977-201ENSMUST00000205283 420 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm44964-201ENSMUST00000207011 273 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.16□□□□□ -1.74
Upf1Q9EPU0 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Gm25896-201ENSMUST00000083713 136 ntBASIC4.16□□□□□ -1.74
Upf1Q9EPU0 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms