Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.23□□□□□ -2.37
Hmgn3Q9DCB1 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Gm22673-201ENSMUST00000104415 131 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Gm14411-201ENSMUST00000121798 914 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Gm24333-201ENSMUST00000175101 84 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Gm27974-201ENSMUST00000183415 105 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Gm37934-201ENSMUST00000192902 402 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Gm25138-201ENSMUST00000083248 136 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Gm14910-201ENSMUST00000121037 1805 ntBASIC0.22□□□□□ -2.37
Hmgn3Q9DCB1 Gm26338-201ENSMUST00000102372 110 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm23991-201ENSMUST00000117033 93 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm12889-201ENSMUST00000118684 241 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm11352-201ENSMUST00000119264 517 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm22477-201ENSMUST00000122569 316 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm26116-201ENSMUST00000175600 77 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm43142-201ENSMUST00000198670 361 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm42506-201ENSMUST00000202009 150 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 CT572985.2-201ENSMUST00000220496 211 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 AC101945.3-201ENSMUST00000226568 153 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm10038-201ENSMUST00000077233 441 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm25128-201ENSMUST00000083339 76 ntBASIC0.21□□□□□ -2.38
Hmgn3Q9DCB1 Gm15126-201ENSMUST00000118631 833 ntBASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 Gm6272-201ENSMUST00000121256 171 ntBASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 Gm25332-201ENSMUST00000158038 105 ntBASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 Gm22382-201ENSMUST00000158185 130 ntBASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 Mir6341-201ENSMUST00000183490 121 ntBASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 Gm27717-201ENSMUST00000183933 151 ntBASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Hmgn3Q9DCB1 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.19□□□□□ -2.38
Hmgn3Q9DCB1 Gm25170-201ENSMUST00000104191 129 ntBASIC0.19□□□□□ -2.38
Hmgn3Q9DCB1 Gm25274-201ENSMUST00000104296 135 ntBASIC0.19□□□□□ -2.38
Hmgn3Q9DCB1 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Hmgn3Q9DCB1 Snora81-201ENSMUST00000157310 178 ntBASIC0.19□□□□□ -2.38
Hmgn3Q9DCB1 Gm25391-201ENSMUST00000157342 134 ntBASIC0.19□□□□□ -2.38
Hmgn3Q9DCB1 Gm16546-201ENSMUST00000159442 355 ntBASIC0.19□□□□□ -2.38
Hmgn3Q9DCB1 Gm29492-201ENSMUST00000187124 457 ntBASIC0.19□□□□□ -2.38
Hmgn3Q9DCB1 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Hmgn3Q9DCB1 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.19□□□□□ -2.38
Hmgn3Q9DCB1 Gm26102-201ENSMUST00000157251 284 ntBASIC0.18□□□□□ -2.38
Hmgn3Q9DCB1 Gm25711-201ENSMUST00000158633 128 ntBASIC0.18□□□□□ -2.38
Hmgn3Q9DCB1 Gm27517-201ENSMUST00000184347 236 ntBASIC0.18□□□□□ -2.38
Hmgn3Q9DCB1 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.18□□□□□ -2.38
Hmgn3Q9DCB1 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC0.18□□□□□ -2.38
Hmgn3Q9DCB1 Gm45439-201ENSMUST00000211723 359 ntBASIC0.18□□□□□ -2.38
Hmgn3Q9DCB1 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.18□□□□□ -2.38
Hmgn3Q9DCB1 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Hmgn3Q9DCB1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.18□□□□□ -2.38
Hmgn3Q9DCB1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm13153-201ENSMUST00000120969 637 ntBASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm8161-201ENSMUST00000168739 481 ntBASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm21815-201ENSMUST00000178213 664 ntBASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm20058-201ENSMUST00000186939 284 ntBASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm28843-201ENSMUST00000189198 678 ntBASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm29546-201ENSMUST00000191171 678 ntBASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Hmgn3Q9DCB1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Gm23321-201ENSMUST00000104465 126 ntBASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Gm14215-201ENSMUST00000120578 221 ntBASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Gm22522-201ENSMUST00000158271 151 ntBASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Gm22164-201ENSMUST00000158413 106 ntBASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Trbv24-201ENSMUST00000194614 347 ntBASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Gm44458-201ENSMUST00000196594 143 ntBASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Gm11351-202ENSMUST00000225724 478 ntBASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Mir410-201ENSMUST00000083563 81 ntBASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.16□□□□□ -2.38
Hmgn3Q9DCB1 Mir695-201ENSMUST00000102261 109 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms