Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm23670-201ENSMUST00000157469 119 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm24601-201ENSMUST00000157970 143 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm24846-201ENSMUST00000158033 108 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm25670-201ENSMUST00000178423 107 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm26239-201ENSMUST00000178842 107 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm22633-201ENSMUST00000179834 107 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm24267-201ENSMUST00000179841 107 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm27991-201ENSMUST00000184804 137 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Mir3569-201ENSMUST00000185080 58 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm37757-201ENSMUST00000193072 210 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm43582-201ENSMUST00000196149 343 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm42475-201ENSMUST00000201212 295 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm43004-201ENSMUST00000201872 703 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm44181-201ENSMUST00000203106 483 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm29817-201ENSMUST00000210098 172 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm24292-201ENSMUST00000082888 107 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm23454-201ENSMUST00000083332 133 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm13728-201ENSMUST00000117471 400 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm12550-201ENSMUST00000118478 329 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm13356-201ENSMUST00000121678 335 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm15281-201ENSMUST00000125181 351 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm15692-201ENSMUST00000152173 352 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm23469-201ENSMUST00000157131 104 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm23230-201ENSMUST00000157298 133 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm25460-201ENSMUST00000157954 127 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm24857-201ENSMUST00000158061 310 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm23342-201ENSMUST00000158958 115 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm8532-201ENSMUST00000179174 461 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Mir7026-201ENSMUST00000184384 67 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm28926-201ENSMUST00000191063 680 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm42672-201ENSMUST00000197821 352 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm29809-201ENSMUST00000218423 493 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Mir30d-201ENSMUST00000083503 82 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Olfr575-201ENSMUST00000084812 957 ntBASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
Cdc40Q9DC48 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm12765-201ENSMUST00000117273 615 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm12235-201ENSMUST00000118596 170 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm24784-201ENSMUST00000157640 62 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm22727-201ENSMUST00000158090 116 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.86□□□□□ -2.11
Cdc40Q9DC48 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm23145-201ENSMUST00000178912 79 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm11395-201ENSMUST00000181011 499 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm27028-201ENSMUST00000182303 399 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm21673-201ENSMUST00000186640 436 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm21135-201ENSMUST00000189023 436 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm38041-201ENSMUST00000194445 661 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm44024-201ENSMUST00000203008 476 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm44182-201ENSMUST00000204052 115 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm44794-201ENSMUST00000206550 411 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm25402-201ENSMUST00000082966 131 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm23042-201ENSMUST00000083866 101 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Cdc40Q9DC48 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Cdc40Q9DC48 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm14774-201ENSMUST00000117857 536 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm14013-201ENSMUST00000119006 270 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm24839-201ENSMUST00000122602 107 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm23048-201ENSMUST00000157237 129 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm24997-201ENSMUST00000157910 105 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm24858-201ENSMUST00000158058 323 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm23068-201ENSMUST00000158239 293 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm3111-201ENSMUST00000167426 490 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm23269-201ENSMUST00000178701 107 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Mir7009-201ENSMUST00000184519 64 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm38146-201ENSMUST00000194121 1293 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.85□□□□□ -2.11
Cdc40Q9DC48 Gm43512-201ENSMUST00000198495 176 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms