Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm45754-201ENSMUST00000212380 279 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Mir300-201ENSMUST00000083485 79 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm23040-201ENSMUST00000083869 163 ntBASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Ccdc3Q9D6Y1 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.63□□□□□ -2.15
Ccdc3Q9D6Y1 AA413626-201ENSMUST00000121125 494 ntBASIC1.63□□□□□ -2.15
Ccdc3Q9D6Y1 Gm2020-201ENSMUST00000145242 579 ntBASIC1.63□□□□□ -2.15
Ccdc3Q9D6Y1 Gm23819-201ENSMUST00000158744 109 ntBASIC1.63□□□□□ -2.15
Ccdc3Q9D6Y1 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.63□□□□□ -2.15
Ccdc3Q9D6Y1 Gm29429-201ENSMUST00000187071 121 ntBASIC1.63□□□□□ -2.15
Ccdc3Q9D6Y1 Gm36966-201ENSMUST00000192217 413 ntBASIC1.63□□□□□ -2.15
Ccdc3Q9D6Y1 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.63□□□□□ -2.15
Ccdc3Q9D6Y1 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.63□□□□□ -2.15
Ccdc3Q9D6Y1 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm22779-201ENSMUST00000104085 107 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm12656-201ENSMUST00000118149 577 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm24902-201ENSMUST00000158126 123 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm25831-201ENSMUST00000158924 163 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm27245-201ENSMUST00000184385 376 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm38231-201ENSMUST00000192030 347 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm18433-201ENSMUST00000192747 197 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm43652-201ENSMUST00000196219 675 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm24165-201ENSMUST00000082718 128 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm5670-201ENSMUST00000093546 372 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm26327-201ENSMUST00000093724 111 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Ccdc3Q9D6Y1 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm25068-201ENSMUST00000103895 110 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm12550-201ENSMUST00000118478 329 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm5646-201ENSMUST00000120568 714 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm15167-201ENSMUST00000121997 187 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm25294-201ENSMUST00000122791 104 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm26414-201ENSMUST00000157674 269 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm24846-201ENSMUST00000158033 108 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Mir6370-201ENSMUST00000183510 120 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm28794-201ENSMUST00000185276 136 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm37771-201ENSMUST00000193121 265 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm42672-201ENSMUST00000197821 352 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm18991-201ENSMUST00000209225 746 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm46312-201ENSMUST00000220961 420 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 AC156574.2-201ENSMUST00000228023 282 ntBASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Ccdc3Q9D6Y1 Gm24889-201ENSMUST00000104388 132 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Mir873a-201ENSMUST00000104863 77 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm12765-201ENSMUST00000117273 615 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm12191-201ENSMUST00000118307 348 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm12646-201ENSMUST00000119144 238 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm9703-201ENSMUST00000119573 343 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm25888-201ENSMUST00000157778 302 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm17377-201ENSMUST00000165184 207 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm17085-201ENSMUST00000165425 502 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm24137-201ENSMUST00000180055 79 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm22391-201ENSMUST00000180356 79 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Mir6382-201ENSMUST00000184055 110 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm19123-201ENSMUST00000190716 651 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm23370-202ENSMUST00000197008 129 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm44024-201ENSMUST00000203008 476 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Gm44182-201ENSMUST00000204052 115 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.6□□□□□ -2.15
Ccdc3Q9D6Y1 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm14049-201ENSMUST00000121009 636 ntBASIC1.59□□□□□ -2.15
Ccdc3Q9D6Y1 Gm23034-201ENSMUST00000158001 147 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms