Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm24737-201ENSMUST00000158861 100 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Mir6926-201ENSMUST00000184562 68 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Gm6060-201ENSMUST00000188671 251 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Gm43193-201ENSMUST00000197732 441 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Gm45678-201ENSMUST00000210509 295 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 CT025602.1-201ENSMUST00000227281 382 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Gm10088-201ENSMUST00000074116 423 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Gm23136-201ENSMUST00000083425 99 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
Ddx56Q9D0R4 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.46□□□□□ -1.85
Ddx56Q9D0R4 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm22037-201ENSMUST00000157280 296 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm24008-201ENSMUST00000157733 138 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm6374-201ENSMUST00000159051 788 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm22308-201ENSMUST00000177609 107 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm44459-201ENSMUST00000203926 160 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm45778-201ENSMUST00000211959 153 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 AL590614.1-201ENSMUST00000226037 268 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm22997-201ENSMUST00000082845 107 ntBASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.46□□□□□ -1.86
Ddx56Q9D0R4 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm26423-201ENSMUST00000104277 128 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm13396-201ENSMUST00000120617 271 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm25572-201ENSMUST00000157527 172 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm22113-201ENSMUST00000158343 104 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm22532-201ENSMUST00000158822 140 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm25835-201ENSMUST00000158917 144 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm27410-201ENSMUST00000183851 115 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm28016-201ENSMUST00000184594 196 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm37162-201ENSMUST00000191708 551 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm8940-201ENSMUST00000212585 219 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Snora7a-201ENSMUST00000082629 140 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ddx56Q9D0R4 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm15098-201ENSMUST00000119036 1508 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Mir759-201ENSMUST00000103254 98 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm24282-201ENSMUST00000104232 66 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm25272-201ENSMUST00000104293 128 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm12513-201ENSMUST00000118617 352 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm12443-201ENSMUST00000122308 323 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm24005-201ENSMUST00000158459 296 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm23476-201ENSMUST00000158881 274 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm22501-201ENSMUST00000158981 127 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm25284-201ENSMUST00000180345 141 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm27648-201ENSMUST00000184315 107 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm43405-201ENSMUST00000198642 337 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm43991-201ENSMUST00000203751 274 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 Gm44600-201ENSMUST00000208540 111 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 AC116460.1-201ENSMUST00000219040 313 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.44□□□□□ -1.86
Ddx56Q9D0R4 LOC667541-201ENSMUST00000223408 278 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms