Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm23296-201ENSMUST00000082555 107 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm24859-201ENSMUST00000082729 107 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm25475-201ENSMUST00000082825 180 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm22658-201ENSMUST00000104196 155 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm7164-201ENSMUST00000117503 450 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm11285-201ENSMUST00000118443 322 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm23895-201ENSMUST00000158108 160 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm25434-201ENSMUST00000158278 167 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm18356-201ENSMUST00000185677 623 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm37007-201ENSMUST00000194234 319 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm43472-201ENSMUST00000200175 154 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm43991-201ENSMUST00000203751 274 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm25698-201ENSMUST00000082897 107 ntBASIC2.59□□□□□ -1.99
Ddx28Q9CWT6 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.59□□□□□ -2
Ddx28Q9CWT6 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.59□□□□□ -2
Ddx28Q9CWT6 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm15272-201ENSMUST00000120865 233 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm23713-201ENSMUST00000157353 70 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm26149-201ENSMUST00000157432 108 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm26088-201ENSMUST00000157896 131 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm22328-201ENSMUST00000158074 112 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm22615-201ENSMUST00000158102 70 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm25066-201ENSMUST00000158145 123 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm23196-201ENSMUST00000158806 107 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ddx28Q9CWT6 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm20058-201ENSMUST00000186939 284 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm28090-201ENSMUST00000189458 664 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.58□□□□□ -2
Ddx28Q9CWT6 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm6615-201ENSMUST00000199426 631 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm15235-201ENSMUST00000200572 194 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.58□□□□□ -2
Ddx28Q9CWT6 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.58□□□□□ -2
Ddx28Q9CWT6 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ddx28Q9CWT6 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ddx28Q9CWT6 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Ddx28Q9CWT6 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Ddx28Q9CWT6 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Ddx28Q9CWT6 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm12819-201ENSMUST00000122223 629 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm23668-201ENSMUST00000157465 111 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm25909-201ENSMUST00000157619 121 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm23033-201ENSMUST00000157996 134 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm24853-201ENSMUST00000158026 121 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm25335-201ENSMUST00000158043 103 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm24885-201ENSMUST00000158783 270 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm25162-201ENSMUST00000158906 159 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm26501-201ENSMUST00000178307 107 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm26180-201ENSMUST00000179942 107 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Mir7k-201ENSMUST00000184115 110 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm43624-201ENSMUST00000197368 180 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm43578-201ENSMUST00000201250 459 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm44524-201ENSMUST00000203899 271 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm9377-201ENSMUST00000207227 623 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm45730-201ENSMUST00000212560 395 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm10264-201ENSMUST00000220589 429 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ddx28Q9CWT6 Gm4945-201ENSMUST00000075152 453 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ddx28Q9CWT6 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.57□□□□□ -2
Ddx28Q9CWT6 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ddx28Q9CWT6 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ddx28Q9CWT6 Gm23747-201ENSMUST00000104228 131 ntBASIC2.56□□□□□ -2
Ddx28Q9CWT6 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Ddx28Q9CWT6 Gm14073-201ENSMUST00000117344 381 ntBASIC2.56□□□□□ -2
Ddx28Q9CWT6 Gm24596-201ENSMUST00000122504 107 ntBASIC2.56□□□□□ -2
Ddx28Q9CWT6 Gm22718-201ENSMUST00000122701 315 ntBASIC2.56□□□□□ -2
Ddx28Q9CWT6 Gm24584-201ENSMUST00000157972 107 ntBASIC2.56□□□□□ -2
Ddx28Q9CWT6 Gm23380-201ENSMUST00000158448 103 ntBASIC2.56□□□□□ -2
Ddx28Q9CWT6 Snord93-201ENSMUST00000175580 71 ntBASIC2.56□□□□□ -2
Ddx28Q9CWT6 Gm25211-201ENSMUST00000177553 107 ntBASIC2.56□□□□□ -2
Ddx28Q9CWT6 Gm24540-201ENSMUST00000177627 107 ntBASIC2.56□□□□□ -2
Ddx28Q9CWT6 Gm25256-201ENSMUST00000177746 107 ntBASIC2.56□□□□□ -2
Ddx28Q9CWT6 Gm22822-201ENSMUST00000177941 107 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms