Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.54□□□□□ -2
Smc1aQ9CU62 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Smc1aQ9CU62 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Smc1aQ9CU62 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Smc1aQ9CU62 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm23011-201ENSMUST00000104148 132 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm13862-201ENSMUST00000121220 197 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm13602-201ENSMUST00000122405 493 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm24839-201ENSMUST00000122602 107 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.53□□□□□ -2
Smc1aQ9CU62 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm22554-201ENSMUST00000157798 147 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm25335-201ENSMUST00000158043 103 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm24464-201ENSMUST00000179697 107 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm26622-201ENSMUST00000180520 298 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm28299-201ENSMUST00000189908 339 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Trbv22-201ENSMUST00000191697 291 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm37771-201ENSMUST00000193121 265 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm33354-201ENSMUST00000195448 906 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm43245-201ENSMUST00000197603 468 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm29848-201ENSMUST00000203107 295 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Smc1aQ9CU62 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.53□□□□□ -2
Smc1aQ9CU62 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm23042-201ENSMUST00000083866 101 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Smc1aQ9CU62 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.53□□□□□ -2
Smc1aQ9CU62 Gm23951-201ENSMUST00000104029 132 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm12765-201ENSMUST00000117273 615 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm14049-201ENSMUST00000121009 636 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm13433-201ENSMUST00000121701 240 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm23956-201ENSMUST00000157211 119 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm8114-201ENSMUST00000172225 484 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm24315-201ENSMUST00000177835 127 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Mir6370-201ENSMUST00000183510 120 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Mir7j-201ENSMUST00000184427 122 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Mir496b-201ENSMUST00000184935 113 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Mir7226-201ENSMUST00000184953 60 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm37557-201ENSMUST00000191640 139 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm43978-201ENSMUST00000203491 451 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.52□□□□□ -2.01
Smc1aQ9CU62 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm26166-201ENSMUST00000083788 107 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm23040-201ENSMUST00000083869 163 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Olfr575-201ENSMUST00000084812 957 ntBASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Smc1aQ9CU62 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Gm14301-201ENSMUST00000120181 324 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Gm14366-201ENSMUST00000121970 730 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Gm22527-201ENSMUST00000158816 106 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Mir7009-201ENSMUST00000184519 64 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Gm37377-201ENSMUST00000191733 304 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Trbv24-201ENSMUST00000194614 347 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Gm44923-201ENSMUST00000206673 85 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.51□□□□□ -2.01
Smc1aQ9CU62 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Gm24150-201ENSMUST00000082759 104 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Gm24661-201ENSMUST00000083205 104 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.51□□□□□ -2.01
Smc1aQ9CU62 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm12370-201ENSMUST00000117809 604 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm14588-201ENSMUST00000119895 172 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm11891-201ENSMUST00000121241 619 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm14765-201ENSMUST00000121954 326 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm23981-201ENSMUST00000157136 106 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm11395-201ENSMUST00000181011 499 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm18185-201ENSMUST00000186725 667 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm17906-201ENSMUST00000202480 901 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm45366-201ENSMUST00000209828 384 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm24044-201ENSMUST00000083107 156 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Snord14d-201ENSMUST00000083424 86 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Mir322-201ENSMUST00000083484 95 ntBASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Smc1aQ9CU62 Gm22771-201ENSMUST00000104449 91 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm15175-201ENSMUST00000117629 132 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm15844-201ENSMUST00000118016 576 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm12871-201ENSMUST00000118758 438 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm14748-201ENSMUST00000119819 411 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm9225-201ENSMUST00000121921 836 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm24601-201ENSMUST00000157970 143 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Gm24846-201ENSMUST00000158033 108 ntBASIC2.49□□□□□ -2.01
Smc1aQ9CU62 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms