Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm27369-201ENSMUST00000185182 71 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm28900-201ENSMUST00000185232 156 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Mir3068-202ENSMUST00000197755 79 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm18991-201ENSMUST00000209225 746 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm22806-201ENSMUST00000082738 136 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm24044-201ENSMUST00000083107 156 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Mir10a-201ENSMUST00000083585 110 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm23422-201ENSMUST00000102000 107 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm22782-201ENSMUST00000104082 132 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm23202-201ENSMUST00000104376 129 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm13378-201ENSMUST00000117483 336 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm14785-201ENSMUST00000120185 539 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm17072-201ENSMUST00000166673 658 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm24816-201ENSMUST00000175311 151 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Mir3075-201ENSMUST00000175340 85 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Mir3069-201ENSMUST00000198802 65 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm44794-201ENSMUST00000206550 411 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm45445-201ENSMUST00000209586 232 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm24268-201ENSMUST00000082990 110 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Mir423-201ENSMUST00000083584 109 ntBASIC2.5□□□□□ -2.01
Ccdc43Q9CR29 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Mdga2-203ENSMUST00000113942 423 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm14362-201ENSMUST00000121679 273 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm15254-201ENSMUST00000149567 273 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm23391-201ENSMUST00000157579 104 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Mir1927-201ENSMUST00000158579 109 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm15900-201ENSMUST00000161584 342 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm42509-201ENSMUST00000197390 781 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm44282-201ENSMUST00000203199 190 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm44966-201ENSMUST00000208096 157 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm45366-201ENSMUST00000209828 384 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm22620-201ENSMUST00000082700 133 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm22572-201ENSMUST00000082985 105 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm24661-201ENSMUST00000083205 104 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Ccdc43Q9CR29 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm15986-201ENSMUST00000122153 400 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm23184-201ENSMUST00000122594 131 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm24937-201ENSMUST00000122597 134 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm23889-201ENSMUST00000122689 104 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm22500-201ENSMUST00000158982 99 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm28745-201ENSMUST00000190069 305 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm6796-201ENSMUST00000211919 243 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Ccdc43Q9CR29 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Gm26015-201ENSMUST00000104402 125 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Gm23803-201ENSMUST00000104610 132 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Mir1195-201ENSMUST00000116818 98 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Gm12793-201ENSMUST00000119268 292 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Gm11389-201ENSMUST00000121407 430 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Gm23124-201ENSMUST00000157650 107 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Snord11-201ENSMUST00000158468 84 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Gm16326-201ENSMUST00000162843 414 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Trbv18-201ENSMUST00000194256 294 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Gm43510-201ENSMUST00000197922 353 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Gm44818-201ENSMUST00000206608 358 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Snord38a-201ENSMUST00000083746 71 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Gm24698-201ENSMUST00000083883 130 ntBASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Ccdc43Q9CR29 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.46□□□□□ -2.02
Ccdc43Q9CR29 Gm12806-201ENSMUST00000119384 268 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms