Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm14823-201ENSMUST00000117698 238 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm15452-201ENSMUST00000119877 240 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm24840-201ENSMUST00000122603 147 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm23538-201ENSMUST00000157535 101 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm22765-201ENSMUST00000158371 128 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Snord11-201ENSMUST00000158468 84 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm24754-201ENSMUST00000177997 107 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm37946-201ENSMUST00000192064 347 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm26166-201ENSMUST00000083788 107 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Olfr575-201ENSMUST00000084812 957 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Rpa3Q9CQ71 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm13903-201ENSMUST00000120945 193 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm26414-201ENSMUST00000157674 269 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm23558-201ENSMUST00000157823 80 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm6395-201ENSMUST00000167639 691 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm25994-201ENSMUST00000175392 101 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm27265-201ENSMUST00000183559 77 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm37162-201ENSMUST00000191708 551 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Snord43-201ENSMUST00000199549 108 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm43578-201ENSMUST00000201250 459 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm46136-201ENSMUST00000214730 565 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm23246-201ENSMUST00000083371 67 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Mir151-201ENSMUST00000083678 68 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.56□□□□□ -2.16
Rpa3Q9CQ71 Gm22750-201ENSMUST00000102076 103 ntBASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 Mir873a-201ENSMUST00000104863 77 ntBASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 Gm14882-201ENSMUST00000117216 218 ntBASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 AA413626-201ENSMUST00000121125 494 ntBASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 Gm25873-201ENSMUST00000180317 107 ntBASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 Gm5670-201ENSMUST00000093546 372 ntBASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Rpa3Q9CQ71 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Gm2768-201ENSMUST00000121062 250 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Gm24837-201ENSMUST00000158683 81 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Gm17377-201ENSMUST00000165184 207 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Gm24137-201ENSMUST00000180055 79 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Gm22391-201ENSMUST00000180356 79 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Mir7118-201ENSMUST00000197760 61 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Gm44408-201ENSMUST00000200205 66 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Gm45240-201ENSMUST00000211437 674 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.54□□□□□ -2.16
Rpa3Q9CQ71 Mir467h-201ENSMUST00000116759 121 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm12351-201ENSMUST00000118727 292 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm15211-201ENSMUST00000118932 528 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Mir1949-201ENSMUST00000157434 141 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm22963-201ENSMUST00000157960 91 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm25958-201ENSMUST00000175114 71 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Mir6335-201ENSMUST00000184081 98 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm28666-201ENSMUST00000186649 274 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm28412-201ENSMUST00000187243 177 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm18775-201ENSMUST00000190763 586 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm36966-201ENSMUST00000192217 413 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm37319-201ENSMUST00000193500 636 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm45071-201ENSMUST00000205353 571 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm45365-201ENSMUST00000209489 256 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Gm45730-201ENSMUST00000212560 395 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Rpa3Q9CQ71 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Rpa3Q9CQ71 Mir301b-201ENSMUST00000102333 97 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms