Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim11Q99PQ2 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim11Q99PQ2 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trim11Q99PQ2 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.4□□□□□ -1.7
Trim11Q99PQ2 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trim11Q99PQ2 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.4□□□□□ -1.7
Trim11Q99PQ2 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm22936-201ENSMUST00000103955 126 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm24234-201ENSMUST00000104316 107 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm13873-201ENSMUST00000119208 427 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm24839-201ENSMUST00000122602 107 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm22098-201ENSMUST00000157930 85 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm25162-201ENSMUST00000158906 159 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm27611-201ENSMUST00000184690 108 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Igkv1-108-201ENSMUST00000198926 298 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm22806-201ENSMUST00000082738 136 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm24204-201ENSMUST00000082950 107 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Mir384-201ENSMUST00000083565 88 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Mir146-201ENSMUST00000083667 65 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Gm22353-201ENSMUST00000083918 136 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.4□□□□□ -1.71
Trim11Q99PQ2 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim11Q99PQ2 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Trim11Q99PQ2 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm24116-201ENSMUST00000103975 107 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Mir294-201ENSMUST00000104710 84 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm22966-201ENSMUST00000157957 129 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm16404-201ENSMUST00000177739 468 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm6625-201ENSMUST00000177870 272 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm6660-201ENSMUST00000179149 468 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm14598-201ENSMUST00000180109 468 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm14625-201ENSMUST00000180231 468 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm27761-201ENSMUST00000184091 131 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm18956-201ENSMUST00000192857 480 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm42647-201ENSMUST00000195939 459 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm45162-201ENSMUST00000209013 618 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm25698-201ENSMUST00000082897 107 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Gm43300-201ENSMUST00000198540 2043 ntBASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim11Q99PQ2 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm24544-201ENSMUST00000103862 110 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm23481-201ENSMUST00000104173 131 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm26387-201ENSMUST00000104238 132 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Mir1193-201ENSMUST00000116761 121 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm15180-201ENSMUST00000117745 492 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm16218-201ENSMUST00000155424 388 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm23702-201ENSMUST00000158840 130 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm24799-201ENSMUST00000178431 79 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm29574-201ENSMUST00000186226 696 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm36964-201ENSMUST00000191876 198 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Snora2b-201ENSMUST00000084005 137 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Trim11Q99PQ2 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Gm25386-201ENSMUST00000157814 288 ntBASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Gm23782-201ENSMUST00000157939 120 ntBASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Gm7909-201ENSMUST00000182688 614 ntBASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Mir8106-201ENSMUST00000184520 139 ntBASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Gm29005-201ENSMUST00000186773 320 ntBASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Gm37417-201ENSMUST00000195257 454 ntBASIC4.37□□□□□ -1.71
Trim11Q99PQ2 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim11Q99PQ2 Gm25411-201ENSMUST00000083760 151 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms