Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Cdk5rap3Q99LM2 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm22752-201ENSMUST00000102083 109 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm14748-201ENSMUST00000119819 411 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm14821-201ENSMUST00000121975 435 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm23184-201ENSMUST00000122594 131 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm25910-201ENSMUST00000157620 140 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm22535-201ENSMUST00000158174 119 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm16561-201ENSMUST00000163001 192 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm25996-201ENSMUST00000175393 117 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm22631-201ENSMUST00000179656 94 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm27991-201ENSMUST00000184804 137 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Mir6376-201ENSMUST00000185149 131 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Mir3068-202ENSMUST00000197755 79 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm18991-201ENSMUST00000209225 746 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm22620-201ENSMUST00000082700 133 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm24661-201ENSMUST00000083205 104 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Cdk5rap3Q99LM2 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Mdga2-203ENSMUST00000113942 423 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Mir1192-201ENSMUST00000116976 121 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm12779-201ENSMUST00000121496 143 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm22554-201ENSMUST00000157798 147 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm24769-201ENSMUST00000158506 129 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm20660-201ENSMUST00000177515 289 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm27490-201ENSMUST00000184754 128 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm28745-201ENSMUST00000190069 305 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm37557-201ENSMUST00000191640 139 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm29950-201ENSMUST00000195273 237 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm42509-201ENSMUST00000197390 781 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm44182-201ENSMUST00000204052 115 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm25586-201ENSMUST00000082499 112 ntBASIC2.38□□□□□ -2.03
Cdk5rap3Q99LM2 Gm22782-201ENSMUST00000104082 132 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm23202-201ENSMUST00000104376 129 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm9043-201ENSMUST00000119677 314 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm23212-201ENSMUST00000122718 60 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm23324-201ENSMUST00000157421 131 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm25866-201ENSMUST00000158245 112 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm15900-201ENSMUST00000161584 342 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm20689-201ENSMUST00000176033 279 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm27660-201ENSMUST00000184028 208 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm28404-201ENSMUST00000190242 453 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm37361-201ENSMUST00000194345 132 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm43510-201ENSMUST00000197922 353 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm45252-201ENSMUST00000211579 397 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Gm46389-201ENSMUST00000223199 392 ntBASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Cdk5rap3Q99LM2 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm14894-201ENSMUST00000117170 270 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm13409-201ENSMUST00000122072 546 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm24937-201ENSMUST00000122597 134 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm22083-201ENSMUST00000157586 102 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm24691-201ENSMUST00000157762 140 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm24885-201ENSMUST00000158783 270 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm37449-201ENSMUST00000193016 270 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm18658-201ENSMUST00000195558 270 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.36□□□□□ -2.03
Cdk5rap3Q99LM2 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Cdk5rap3Q99LM2 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Cdk5rap3Q99LM2 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.35□□□□□ -2.03
Cdk5rap3Q99LM2 Gm14670-201ENSMUST00000117327 337 ntBASIC2.35□□□□□ -2.03
Cdk5rap3Q99LM2 Gm25066-201ENSMUST00000158145 123 ntBASIC2.35□□□□□ -2.03
Cdk5rap3Q99LM2 Gm24922-201ENSMUST00000158511 102 ntBASIC2.35□□□□□ -2.03
Cdk5rap3Q99LM2 Gm27755-201ENSMUST00000184623 132 ntBASIC2.35□□□□□ -2.03
Cdk5rap3Q99LM2 Gm29604-201ENSMUST00000187176 163 ntBASIC2.35□□□□□ -2.03
Cdk5rap3Q99LM2 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms