Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Mir1193-201ENSMUST00000116761 121 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm7164-201ENSMUST00000117503 450 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm16242-201ENSMUST00000117741 334 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm23470-201ENSMUST00000157129 120 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm23325-201ENSMUST00000157422 129 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm24716-201ENSMUST00000157524 104 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm3470-201ENSMUST00000160819 420 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm16111-201ENSMUST00000162128 285 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm26501-201ENSMUST00000178307 107 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Mir8103-201ENSMUST00000183945 107 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm20058-201ENSMUST00000186939 284 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm2436-201ENSMUST00000219562 774 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm4945-201ENSMUST00000075152 453 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Snora23-201ENSMUST00000082517 184 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm26327-201ENSMUST00000093724 111 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm25207-201ENSMUST00000093745 107 ntBASIC2.78□□□□□ -1.96
Cstf3Q99LI7 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Cstf3Q99LI7 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
Cstf3Q99LI7 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.78□□□□□ -1.97
Cstf3Q99LI7 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Cstf3Q99LI7 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Mir499-201ENSMUST00000102357 79 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm22939-201ENSMUST00000103958 131 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm14973-201ENSMUST00000117248 255 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm14940-201ENSMUST00000119309 495 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm22328-201ENSMUST00000158074 112 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm27510-201ENSMUST00000158214 64 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm5967-201ENSMUST00000172723 494 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm37007-201ENSMUST00000194234 319 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm37361-201ENSMUST00000194345 132 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm34073-201ENSMUST00000195736 212 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm44399-201ENSMUST00000205043 226 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.77□□□□□ -1.97
Cstf3Q99LI7 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm22364-201ENSMUST00000083097 98 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 AF357428-201ENSMUST00000083815 69 ntBASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Cstf3Q99LI7 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm42606-201ENSMUST00000114209 239 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm15029-201ENSMUST00000119742 199 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm12897-201ENSMUST00000120341 250 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm13903-201ENSMUST00000120945 193 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm15466-201ENSMUST00000122299 333 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm23588-201ENSMUST00000157659 99 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm25434-201ENSMUST00000158278 167 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm7925-201ENSMUST00000166690 401 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Mir5099-201ENSMUST00000175257 74 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm26180-201ENSMUST00000179942 107 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Mir7667-201ENSMUST00000183866 63 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm6060-201ENSMUST00000188671 251 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm37054-201ENSMUST00000193481 543 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm43472-201ENSMUST00000200175 154 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm43578-201ENSMUST00000201250 459 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm23247-201ENSMUST00000083373 107 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm22365-201ENSMUST00000093750 117 ntBASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Cstf3Q99LI7 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm24126-201ENSMUST00000104111 106 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Snord98-201ENSMUST00000116819 65 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm16171-201ENSMUST00000118004 324 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm15183-201ENSMUST00000118933 348 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm14269-201ENSMUST00000120455 306 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm11834-201ENSMUST00000122257 585 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm16218-201ENSMUST00000155424 388 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm24908-201ENSMUST00000157294 127 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm25909-201ENSMUST00000157619 121 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm24853-201ENSMUST00000158026 121 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm22836-201ENSMUST00000158441 61 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm25162-201ENSMUST00000158906 159 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Gm3027-201ENSMUST00000167579 451 ntBASIC2.75□□□□□ -1.97
Cstf3Q99LI7 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 148 ms