Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.72□□□□□ -2.29
Ccdc58Q8R3Q6 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Ccdc58Q8R3Q6 Gm20477-201ENSMUST00000174028 280 ntBASIC0.72□□□□□ -2.29
Ccdc58Q8R3Q6 Gm27587-201ENSMUST00000185116 163 ntBASIC0.72□□□□□ -2.29
Ccdc58Q8R3Q6 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC0.72□□□□□ -2.29
Ccdc58Q8R3Q6 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC0.72□□□□□ -2.29
Ccdc58Q8R3Q6 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.72□□□□□ -2.29
Ccdc58Q8R3Q6 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.72□□□□□ -2.29
Ccdc58Q8R3Q6 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Ccdc58Q8R3Q6 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Gm25421-201ENSMUST00000104218 164 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Gm9001-201ENSMUST00000121642 399 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Gm23463-201ENSMUST00000122468 99 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Gm22716-201ENSMUST00000177596 107 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Gm29460-201ENSMUST00000188607 714 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Gm21089-201ENSMUST00000215843 325 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 AC134335.1-201ENSMUST00000227626 329 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Snord96a-201ENSMUST00000082791 81 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Snord35a-201ENSMUST00000083884 90 ntBASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Ccdc58Q8R3Q6 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm23431-201ENSMUST00000104006 107 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm649-201ENSMUST00000117284 1054 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm12392-201ENSMUST00000118014 938 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm11490-201ENSMUST00000118128 272 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm15659-201ENSMUST00000118881 341 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm12417-201ENSMUST00000119153 403 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm13080-201ENSMUST00000120556 420 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm22338-201ENSMUST00000157715 129 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm27660-201ENSMUST00000184028 208 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm44482-201ENSMUST00000199232 103 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm18691-201ENSMUST00000203593 872 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 AC157017.2-201ENSMUST00000218354 777 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 CT030238.4-201ENSMUST00000228579 801 ntBASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.7□□□□□ -2.3
Ccdc58Q8R3Q6 Gm11606-201ENSMUST00000120706 617 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gm24846-201ENSMUST00000158033 108 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gm25768-201ENSMUST00000158570 98 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gm3025-201ENSMUST00000163454 489 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gm3111-201ENSMUST00000167426 490 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Mir7675-201ENSMUST00000184262 58 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gm19891-201ENSMUST00000189771 303 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gm44050-201ENSMUST00000204263 527 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gm23735-201ENSMUST00000082551 134 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gm22443-201ENSMUST00000082890 107 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gm45263-201ENSMUST00000210377 1375 ntBASIC0.69□□□□□ -2.3
Ccdc58Q8R3Q6 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm9432-201ENSMUST00000117810 759 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm15162-201ENSMUST00000119325 283 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm12372-201ENSMUST00000121654 768 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm25637-201ENSMUST00000157529 107 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm23116-201ENSMUST00000158481 67 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm2966-201ENSMUST00000166052 481 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm28825-201ENSMUST00000186233 238 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm37771-201ENSMUST00000193121 265 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm44320-201ENSMUST00000199276 86 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm23939-201ENSMUST00000082880 133 ntBASIC0.68□□□□□ -2.3
Ccdc58Q8R3Q6 Gm45577-201ENSMUST00000210206 2287 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Gm15714-201ENSMUST00000117168 250 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Gm13239-201ENSMUST00000119920 637 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Gm22164-201ENSMUST00000158413 106 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Gm23473-201ENSMUST00000158883 116 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Gm17052-201ENSMUST00000165496 289 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Gm27522-201ENSMUST00000183949 230 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Gm38041-201ENSMUST00000194445 661 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Gm44754-201ENSMUST00000208155 400 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Gm25739-201ENSMUST00000082886 107 ntBASIC0.67□□□□□ -2.3
Ccdc58Q8R3Q6 Gm12656-201ENSMUST00000118149 577 ntBASIC0.66□□□□□ -2.3
Ccdc58Q8R3Q6 Gm14566-201ENSMUST00000118915 321 ntBASIC0.66□□□□□ -2.3
Ccdc58Q8R3Q6 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.66□□□□□ -2.3
Ccdc58Q8R3Q6 Gm26195-201ENSMUST00000175035 101 ntBASIC0.66□□□□□ -2.3
Ccdc58Q8R3Q6 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.66□□□□□ -2.3
Ccdc58Q8R3Q6 Mir6962-201ENSMUST00000199512 63 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms