Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm22984-201ENSMUST00000122751 122 ntBASIC3.4□□□□□ -1.87
Clrn1Q8K445 Gm22516-201ENSMUST00000158266 124 ntBASIC3.4□□□□□ -1.87
Clrn1Q8K445 Gm22840-201ENSMUST00000158444 136 ntBASIC3.4□□□□□ -1.87
Clrn1Q8K445 Gm27392-201ENSMUST00000185041 101 ntBASIC3.4□□□□□ -1.87
Clrn1Q8K445 Gm36964-201ENSMUST00000191876 198 ntBASIC3.4□□□□□ -1.87
Clrn1Q8K445 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.4□□□□□ -1.87
Clrn1Q8K445 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.4□□□□□ -1.87
Clrn1Q8K445 Gm9377-201ENSMUST00000207227 623 ntBASIC3.4□□□□□ -1.87
Clrn1Q8K445 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.4□□□□□ -1.87
Clrn1Q8K445 Snord15a-201ENSMUST00000083888 148 ntBASIC3.4□□□□□ -1.87
Clrn1Q8K445 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Clrn1Q8K445 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Clrn1Q8K445 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Clrn1Q8K445 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm24423-201ENSMUST00000101982 106 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm23841-201ENSMUST00000116951 114 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm15268-201ENSMUST00000118845 352 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm14846-201ENSMUST00000121868 216 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm13868-201ENSMUST00000122411 294 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm25664-201ENSMUST00000157697 107 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm23892-201ENSMUST00000158105 130 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Snord92-201ENSMUST00000175548 85 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm43651-201ENSMUST00000199796 439 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Snord14d-201ENSMUST00000083424 86 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm25651-201ENSMUST00000083782 119 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Clrn1Q8K445 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Clrn1Q8K445 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.38□□□□□ -1.87
Clrn1Q8K445 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm15714-201ENSMUST00000117168 250 ntBASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm24308-201ENSMUST00000177773 114 ntBASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm42578-201ENSMUST00000199960 194 ntBASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm40810-201ENSMUST00000219149 253 ntBASIC3.38□□□□□ -1.87
Clrn1Q8K445 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.38□□□□□ -1.87
Clrn1Q8K445 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.38□□□□□ -1.87
Clrn1Q8K445 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm23731-201ENSMUST00000083749 107 ntBASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.38□□□□□ -1.87
Clrn1Q8K445 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Clrn1Q8K445 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Clrn1Q8K445 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Clrn1Q8K445 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm9157-201ENSMUST00000117673 225 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm12721-201ENSMUST00000120621 268 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm22310-201ENSMUST00000157509 116 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm22315-201ENSMUST00000158010 143 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm26287-201ENSMUST00000158887 81 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm20542-201ENSMUST00000174582 372 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm28849-201ENSMUST00000188127 174 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm29657-201ENSMUST00000189807 342 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm28330-201ENSMUST00000190353 171 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm37923-201ENSMUST00000191624 161 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm19620-201ENSMUST00000195972 434 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm44337-201ENSMUST00000196553 114 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Mir376a-201ENSMUST00000197584 68 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.37□□□□□ -1.87
Clrn1Q8K445 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Clrn1Q8K445 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.37□□□□□ -1.87
Clrn1Q8K445 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn1Q8K445 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn1Q8K445 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.36□□□□□ -1.87
Clrn1Q8K445 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.36□□□□□ -1.87
Clrn1Q8K445 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Clrn1Q8K445 Gm12335-201ENSMUST00000119738 327 ntBASIC3.36□□□□□ -1.87
Clrn1Q8K445 Gm25107-201ENSMUST00000122472 129 ntBASIC3.36□□□□□ -1.87
Clrn1Q8K445 Gm25454-201ENSMUST00000157947 315 ntBASIC3.36□□□□□ -1.87
Clrn1Q8K445 Gm23257-201ENSMUST00000158322 132 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms