Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm13504-201ENSMUST00000117490 316 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm25391-201ENSMUST00000157342 134 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm24787-201ENSMUST00000157380 123 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm25982-201ENSMUST00000157920 101 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm23380-201ENSMUST00000158448 103 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm22891-201ENSMUST00000158641 164 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm25977-201ENSMUST00000158697 85 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm8292-201ENSMUST00000162574 396 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm23793-201ENSMUST00000179396 117 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm29231-201ENSMUST00000179850 319 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm37807-201ENSMUST00000194310 190 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm42647-201ENSMUST00000195939 459 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm44468-201ENSMUST00000199516 105 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm45730-201ENSMUST00000212560 395 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Gm23249-201ENSMUST00000083369 161 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.55□□□□□ -2
Ccdc28bQ8CEG5 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm25500-201ENSMUST00000104426 123 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm13343-201ENSMUST00000116474 105 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm13510-201ENSMUST00000118659 429 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm12779-201ENSMUST00000121496 143 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm23000-201ENSMUST00000157083 139 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm23600-201ENSMUST00000157260 71 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm24879-201ENSMUST00000158386 143 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm8580-201ENSMUST00000160295 464 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm15914-201ENSMUST00000161922 309 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm17166-201ENSMUST00000172006 431 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm28418-201ENSMUST00000186179 423 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm29604-201ENSMUST00000187176 163 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm28647-201ENSMUST00000188416 197 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm6060-201ENSMUST00000188671 251 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm29229-201ENSMUST00000188874 323 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Gm25199-201ENSMUST00000083095 104 ntBASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc28bQ8CEG5 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Mir687-201ENSMUST00000102166 89 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm12458-201ENSMUST00000119387 495 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm11606-201ENSMUST00000120706 617 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm14287-201ENSMUST00000121060 117 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm14972-201ENSMUST00000121780 364 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm22718-201ENSMUST00000122701 315 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm23667-201ENSMUST00000157466 120 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm25427-201ENSMUST00000157605 103 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm22611-201ENSMUST00000158288 150 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm22085-201ENSMUST00000158344 110 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm24577-201ENSMUST00000158580 63 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Mir6335-201ENSMUST00000184081 98 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm27582-201ENSMUST00000184084 126 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm45678-201ENSMUST00000210509 295 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Gm25856-201ENSMUST00000082786 75 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc28bQ8CEG5 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.53□□□□□ -2.01
Ccdc28bQ8CEG5 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
Ccdc28bQ8CEG5 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc28bQ8CEG5 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
Ccdc28bQ8CEG5 Gm22936-201ENSMUST00000103955 126 ntBASIC2.52□□□□□ -2.01
Ccdc28bQ8CEG5 Snord98-201ENSMUST00000116819 65 ntBASIC2.52□□□□□ -2.01
Ccdc28bQ8CEG5 Gm14352-201ENSMUST00000119250 449 ntBASIC2.52□□□□□ -2.01
Ccdc28bQ8CEG5 Gm14843-201ENSMUST00000119596 212 ntBASIC2.52□□□□□ -2.01
Ccdc28bQ8CEG5 Gm22957-201ENSMUST00000122511 123 ntBASIC2.52□□□□□ -2.01
Ccdc28bQ8CEG5 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms