Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Nup88Q8CEC0 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm14823-201ENSMUST00000117698 238 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm14013-201ENSMUST00000119006 270 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm14852-201ENSMUST00000120065 647 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm25392-201ENSMUST00000157335 297 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm24716-201ENSMUST00000157524 104 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm23752-201ENSMUST00000157584 115 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm27385-201ENSMUST00000184747 104 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Mir378a-201ENSMUST00000198300 66 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm43529-201ENSMUST00000199178 412 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm45013-201ENSMUST00000206883 178 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm23247-201ENSMUST00000083373 107 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.88□□□□□ -1.95
Nup88Q8CEC0 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm14940-201ENSMUST00000119309 495 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm11556-201ENSMUST00000120751 288 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm14364-201ENSMUST00000129209 267 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm22664-201ENSMUST00000158719 105 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm5967-201ENSMUST00000172723 494 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm29658-201ENSMUST00000185404 230 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm28825-201ENSMUST00000186233 238 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm42739-201ENSMUST00000200687 226 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm5001-201ENSMUST00000204361 331 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm44844-201ENSMUST00000207242 336 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm8031-201ENSMUST00000213430 626 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Snord14d-201ENSMUST00000083424 86 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Nup88Q8CEC0 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm22486-201ENSMUST00000116815 137 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm12617-201ENSMUST00000121268 381 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm24908-201ENSMUST00000157294 127 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm24475-201ENSMUST00000157435 143 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm23196-201ENSMUST00000158806 107 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm6059-201ENSMUST00000196903 340 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm43991-201ENSMUST00000203751 274 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm44870-201ENSMUST00000207291 357 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm8125-201ENSMUST00000216602 738 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm24698-201ENSMUST00000083883 130 ntBASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.86□□□□□ -1.95
Nup88Q8CEC0 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Nup88Q8CEC0 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm22834-201ENSMUST00000102021 79 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm22779-201ENSMUST00000104085 107 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm22656-201ENSMUST00000104199 171 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm14355-201ENSMUST00000117352 264 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm13355-201ENSMUST00000117996 317 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm15030-201ENSMUST00000119804 484 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm24211-201ENSMUST00000158264 107 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm29350-201ENSMUST00000189141 541 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm44320-201ENSMUST00000199276 86 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.85□□□□□ -1.95
Nup88Q8CEC0 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm22577-201ENSMUST00000083731 109 ntBASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Nup88Q8CEC0 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Nup88Q8CEC0 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Nup88Q8CEC0 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.84□□□□□ -1.95
Nup88Q8CEC0 Gm13876-201ENSMUST00000118451 261 ntBASIC2.84□□□□□ -1.95
Nup88Q8CEC0 Gm11359-201ENSMUST00000120039 567 ntBASIC2.84□□□□□ -1.95
Nup88Q8CEC0 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.84□□□□□ -1.95
Nup88Q8CEC0 Gm23523-201ENSMUST00000180190 107 ntBASIC2.84□□□□□ -1.95
Nup88Q8CEC0 Gm3852-201ENSMUST00000182781 264 ntBASIC2.84□□□□□ -1.95
Nup88Q8CEC0 Gm43722-201ENSMUST00000196054 124 ntBASIC2.84□□□□□ -1.95
Nup88Q8CEC0 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms