Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm650-201ENSMUST00000144428 1551 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm14448-201ENSMUST00000116383 210 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm15844-201ENSMUST00000118016 576 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm23713-201ENSMUST00000157353 70 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm22615-201ENSMUST00000158102 70 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm25519-201ENSMUST00000158392 127 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm25121-201ENSMUST00000179846 79 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Mir7118-201ENSMUST00000197760 61 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm44063-201ENSMUST00000203307 376 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm45403-201ENSMUST00000209453 276 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm7948-201ENSMUST00000212607 844 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm10161-201ENSMUST00000091506 204 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc87Q8CDL9 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm15714-201ENSMUST00000117168 250 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm25054-201ENSMUST00000157370 97 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm22216-201ENSMUST00000157557 114 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm25384-201ENSMUST00000157807 105 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm27410-201ENSMUST00000183851 115 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm28825-201ENSMUST00000186233 238 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm32033-201ENSMUST00000193483 339 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm44524-201ENSMUST00000203899 271 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm44824-201ENSMUST00000207021 229 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm45687-201ENSMUST00000209454 155 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm30674-201ENSMUST00000214523 392 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Mir101b-201ENSMUST00000083622 97 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm23851-201ENSMUST00000083831 103 ntBASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc87Q8CDL9 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Ccdc87Q8CDL9 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Ccdc87Q8CDL9 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.46□□□□□ -1.85
Ccdc87Q8CDL9 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm12025-201ENSMUST00000117768 144 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm13518-201ENSMUST00000120018 233 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm14761-201ENSMUST00000121363 262 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm6956-201ENSMUST00000134724 546 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm24138-201ENSMUST00000157572 114 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm23559-201ENSMUST00000157824 103 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm24997-201ENSMUST00000157910 105 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm22945-201ENSMUST00000158557 157 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm25486-201ENSMUST00000158726 63 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Mir6346-201ENSMUST00000183982 81 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm29104-201ENSMUST00000186304 222 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm29490-201ENSMUST00000190923 342 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm23370-202ENSMUST00000197008 129 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm44161-201ENSMUST00000203532 253 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Gm24460-201ENSMUST00000082731 106 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Snord14d-201ENSMUST00000083424 86 ntBASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc87Q8CDL9 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm13396-201ENSMUST00000120617 271 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm14581-201ENSMUST00000121726 198 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm16358-201ENSMUST00000146046 210 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm22843-201ENSMUST00000157710 134 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Mir6905-201ENSMUST00000184228 70 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm42621-201ENSMUST00000198114 275 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm42594-201ENSMUST00000199511 246 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm44811-201ENSMUST00000209120 228 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Gm39147-201ENSMUST00000211376 465 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc87Q8CDL9 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc87Q8CDL9 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Ccdc87Q8CDL9 Gm24338-201ENSMUST00000104205 127 ntBASIC3.44□□□□□ -1.86
Ccdc87Q8CDL9 Gm24890-201ENSMUST00000104389 102 ntBASIC3.44□□□□□ -1.86
Ccdc87Q8CDL9 Gm14883-201ENSMUST00000120179 157 ntBASIC3.44□□□□□ -1.86
Ccdc87Q8CDL9 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms