Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm11065-201ENSMUST00000111462 228 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm12656-201ENSMUST00000118149 577 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm12550-201ENSMUST00000118478 329 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm14899-201ENSMUST00000118673 548 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm24601-201ENSMUST00000157970 143 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm19932-201ENSMUST00000177033 313 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm26864-201ENSMUST00000181346 156 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm27493-201ENSMUST00000184128 78 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm42739-201ENSMUST00000200687 226 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm44182-201ENSMUST00000204052 115 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm16976-205ENSMUST00000227324 226 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm25788-201ENSMUST00000082721 131 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Mir19a-201ENSMUST00000083482 82 ntBASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trub1Q8C0D0 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm22091-201ENSMUST00000116908 127 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm11845-201ENSMUST00000117886 327 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm13588-201ENSMUST00000120026 135 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm16428-201ENSMUST00000121193 723 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm24846-201ENSMUST00000158033 108 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm17377-201ENSMUST00000165184 207 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm25958-201ENSMUST00000175114 71 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm36966-201ENSMUST00000192217 413 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm43652-201ENSMUST00000196219 675 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.46□□□□□ -2.18
Trub1Q8C0D0 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.46□□□□□ -2.18
Trub1Q8C0D0 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm5670-201ENSMUST00000093546 372 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.46□□□□□ -2.18
Trub1Q8C0D0 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm11352-201ENSMUST00000119264 517 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.45□□□□□ -2.18
Trub1Q8C0D0 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm23718-201ENSMUST00000157350 307 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm22527-201ENSMUST00000158816 106 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm6660-201ENSMUST00000179149 468 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Mir6335-201ENSMUST00000184081 98 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Mir7225-201ENSMUST00000184178 54 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Mir7241-201ENSMUST00000184532 64 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm28825-201ENSMUST00000186233 238 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm44024-201ENSMUST00000203008 476 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm24412-201ENSMUST00000083426 109 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Mir107-201ENSMUST00000083660 87 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.45□□□□□ -2.18
Trub1Q8C0D0 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm25992-201ENSMUST00000102437 109 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm14882-201ENSMUST00000117216 218 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm14774-201ENSMUST00000117857 536 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm12646-201ENSMUST00000119144 238 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm11786-201ENSMUST00000120799 155 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm25294-201ENSMUST00000122791 104 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm2020-201ENSMUST00000145242 579 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm25625-201ENSMUST00000157221 96 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm17164-201ENSMUST00000169013 506 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Mir3964-201ENSMUST00000174898 74 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm27265-201ENSMUST00000183559 77 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Mir6382-201ENSMUST00000184055 110 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm28666-201ENSMUST00000186649 274 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm18775-201ENSMUST00000190763 586 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm42647-201ENSMUST00000195939 459 ntBASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trub1Q8C0D0 Gm26166-201ENSMUST00000083788 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms