Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm23381-201ENSMUST00000157676 94 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm21978-201ENSMUST00000179696 377 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm28745-201ENSMUST00000190069 305 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm42509-201ENSMUST00000197390 781 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm3724-201ENSMUST00000197957 349 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm43529-201ENSMUST00000199178 412 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm44083-201ENSMUST00000203114 337 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm7692-201ENSMUST00000213534 409 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm25788-201ENSMUST00000082721 131 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Gm23202-201ENSMUST00000104376 129 ntBASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Gm13378-201ENSMUST00000117483 336 ntBASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Gm12235-201ENSMUST00000118596 170 ntBASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Gm8532-201ENSMUST00000179174 461 ntBASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Gm23862-201ENSMUST00000180342 94 ntBASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Gm32300-201ENSMUST00000221735 515 ntBASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.26□□□□□ -2.05
Ccdc40Q8BI79 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm25168-201ENSMUST00000104189 132 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm12793-201ENSMUST00000119268 292 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm25863-201ENSMUST00000158249 329 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm22093-201ENSMUST00000158980 111 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm22500-201ENSMUST00000158982 99 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm9593-201ENSMUST00000166034 469 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm17072-201ENSMUST00000166673 658 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Mir6995-201ENSMUST00000183658 71 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm42925-201ENSMUST00000197359 285 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm42807-201ENSMUST00000200141 329 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm44011-201ENSMUST00000203336 394 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Mir301-201ENSMUST00000083655 86 ntBASIC2.25□□□□□ -2.05
Ccdc40Q8BI79 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm23472-201ENSMUST00000101806 191 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm22831-201ENSMUST00000102473 109 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm14215-201ENSMUST00000120578 221 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm14848-201ENSMUST00000121850 467 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm24241-201ENSMUST00000157787 145 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm22076-201ENSMUST00000158601 84 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm24837-201ENSMUST00000158683 81 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm22668-201ENSMUST00000158716 260 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm23025-201ENSMUST00000158769 111 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm23813-201ENSMUST00000175153 77 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm18417-201ENSMUST00000176564 648 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm24497-201ENSMUST00000177868 191 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm25939-201ENSMUST00000179876 191 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm27722-201ENSMUST00000183908 76 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm19694-201ENSMUST00000192364 505 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm44990-201ENSMUST00000203922 217 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm45386-201ENSMUST00000210194 218 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm23444-201ENSMUST00000082922 191 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Gm24045-201ENSMUST00000083113 98 ntBASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc40Q8BI79 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc40Q8BI79 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Ccdc40Q8BI79 Gm14765-201ENSMUST00000121954 326 ntBASIC2.23□□□□□ -2.05
Ccdc40Q8BI79 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.23□□□□□ -2.05
Ccdc40Q8BI79 Gm28058-201ENSMUST00000186421 264 ntBASIC2.23□□□□□ -2.05
Ccdc40Q8BI79 Gm28474-201ENSMUST00000188501 315 ntBASIC2.23□□□□□ -2.05
Ccdc40Q8BI79 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Ccdc40Q8BI79 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.23□□□□□ -2.05
Ccdc40Q8BI79 Snora69-201ENSMUST00000083708 131 ntBASIC2.23□□□□□ -2.05
Ccdc40Q8BI79 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc40Q8BI79 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms