Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm24907-201ENSMUST00000116932 128 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm13728-201ENSMUST00000117471 400 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm11849-201ENSMUST00000121293 261 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm23713-201ENSMUST00000157353 70 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm22615-201ENSMUST00000158102 70 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm22386-201ENSMUST00000158192 129 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm17161-201ENSMUST00000169187 524 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm22192-201ENSMUST00000175128 85 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm24306-201ENSMUST00000180229 79 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm28299-201ENSMUST00000189908 339 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm37778-201ENSMUST00000191732 190 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm45590-201ENSMUST00000209715 262 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm25632-201ENSMUST00000083112 85 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm25582-201ENSMUST00000083412 110 ntBASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Clrn3Q8BHH8 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm15714-201ENSMUST00000117168 250 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm14558-201ENSMUST00000117458 381 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Mir1942-201ENSMUST00000157274 63 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm22227-201ENSMUST00000157356 259 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm24478-201ENSMUST00000157439 158 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm25451-201ENSMUST00000177832 121 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Mir7678-201ENSMUST00000185076 71 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm37757-201ENSMUST00000193072 210 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm43431-201ENSMUST00000198577 340 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm26446-201ENSMUST00000082455 103 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Mir452-201ENSMUST00000093629 85 ntBASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Clrn3Q8BHH8 Gm13356-201ENSMUST00000121678 335 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm16129-201ENSMUST00000152628 486 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm25706-201ENSMUST00000157828 247 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm22389-201ENSMUST00000158193 301 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm25707-201ENSMUST00000175120 96 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm27979-201ENSMUST00000185126 56 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm28956-201ENSMUST00000189047 427 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm43114-201ENSMUST00000198298 343 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm18703-201ENSMUST00000215318 333 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 AC134335.1-201ENSMUST00000227626 329 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Mir322-201ENSMUST00000083484 95 ntBASIC1.73□□□□□ -2.13
Clrn3Q8BHH8 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm24430-201ENSMUST00000104077 104 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm15692-201ENSMUST00000152173 352 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm24837-201ENSMUST00000158683 81 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm24222-201ENSMUST00000158834 93 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm5900-201ENSMUST00000179862 375 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm27028-201ENSMUST00000182303 399 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm28058-201ENSMUST00000186421 264 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm21673-201ENSMUST00000186640 436 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm21135-201ENSMUST00000189023 436 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm10297-201ENSMUST00000207136 651 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm18453-201ENSMUST00000208000 626 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Gm45730-201ENSMUST00000212560 395 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Mir29c-201ENSMUST00000083614 88 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Mir107-201ENSMUST00000083660 87 ntBASIC1.72□□□□□ -2.13
Clrn3Q8BHH8 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms