Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm44063-201ENSMUST00000203307 376 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm44161-201ENSMUST00000203532 253 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm23723-201ENSMUST00000082996 132 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm23727-201ENSMUST00000083352 164 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm23851-201ENSMUST00000083831 103 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm6956-201ENSMUST00000134724 546 ntBASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm22216-201ENSMUST00000157557 114 ntBASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm22843-201ENSMUST00000157710 134 ntBASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm23370-202ENSMUST00000197008 129 ntBASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm19202-201ENSMUST00000198096 808 ntBASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Gm45395-201ENSMUST00000209891 559 ntBASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Ubfd1Q78JW9 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm15714-201ENSMUST00000117168 250 ntBASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm11356-201ENSMUST00000118974 192 ntBASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm12412-201ENSMUST00000121867 328 ntBASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm25397-201ENSMUST00000176951 92 ntBASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm6660-201ENSMUST00000179149 468 ntBASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm27893-201ENSMUST00000184408 194 ntBASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.12□□□□□ -1.91
Ubfd1Q78JW9 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm15098-201ENSMUST00000119036 1508 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm14448-201ENSMUST00000116383 210 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm5937-201ENSMUST00000119715 643 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm23641-201ENSMUST00000157857 101 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm23779-201ENSMUST00000157938 64 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm25490-201ENSMUST00000158734 130 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Mir5127-201ENSMUST00000175295 71 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm27783-201ENSMUST00000183534 105 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm28408-201ENSMUST00000191557 463 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm44083-201ENSMUST00000203114 337 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm44881-201ENSMUST00000205425 367 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm44858-201ENSMUST00000207360 154 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm10298-201ENSMUST00000074801 265 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm24460-201ENSMUST00000082731 106 ntBASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ubfd1Q78JW9 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm24172-201ENSMUST00000104127 117 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm26400-201ENSMUST00000175012 85 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm26297-201ENSMUST00000179464 132 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm22263-201ENSMUST00000180060 104 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm28825-201ENSMUST00000186233 238 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm29602-201ENSMUST00000186887 442 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm44524-201ENSMUST00000203899 271 ntBASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.1□□□□□ -1.91
Ubfd1Q78JW9 Gm44600-201ENSMUST00000208540 111 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms