Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
Topbp1Q6ZQF0 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.09□□□□□ -2.24
Topbp1Q6ZQF0 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.09□□□□□ -2.24
Topbp1Q6ZQF0 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Topbp1Q6ZQF0 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Gm9703-201ENSMUST00000119573 343 ntBASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Gm26101-201ENSMUST00000157246 105 ntBASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Gm24086-201ENSMUST00000175171 98 ntBASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Gm27599-201ENSMUST00000183758 174 ntBASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Mir6399-201ENSMUST00000184050 84 ntBASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Gm34701-202ENSMUST00000204685 360 ntBASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.08□□□□□ -2.24
Topbp1Q6ZQF0 Gm22689-201ENSMUST00000102452 110 ntBASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 Gm13731-201ENSMUST00000117332 196 ntBASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 Gm23278-201ENSMUST00000157911 143 ntBASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 Gm16546-201ENSMUST00000159442 355 ntBASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 Gm38060-201ENSMUST00000194822 464 ntBASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 Gm43284-201ENSMUST00000200103 253 ntBASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.07□□□□□ -2.24
Topbp1Q6ZQF0 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Mir1949-201ENSMUST00000157434 141 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm22769-201ENSMUST00000158367 98 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm23704-201ENSMUST00000158844 340 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm8161-201ENSMUST00000168739 481 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm25035-201ENSMUST00000175414 77 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm29815-201ENSMUST00000202418 178 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm17991-201ENSMUST00000208139 297 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm24805-201ENSMUST00000082931 104 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.06□□□□□ -2.24
Topbp1Q6ZQF0 Gm23792-201ENSMUST00000122557 93 ntBASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Gm23752-201ENSMUST00000157584 115 ntBASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Gm17937-201ENSMUST00000197908 742 ntBASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Olfr197-201ENSMUST00000080031 926 ntBASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Gm24258-201ENSMUST00000083739 133 ntBASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Mir223-201ENSMUST00000102112 110 ntBASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Gm14674-201ENSMUST00000117816 342 ntBASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Gm23933-201ENSMUST00000178405 79 ntBASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.05□□□□□ -2.24
Topbp1Q6ZQF0 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.04□□□□□ -2.24
Topbp1Q6ZQF0 Gm20386-201ENSMUST00000174010 132 ntBASIC1.04□□□□□ -2.24
Topbp1Q6ZQF0 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.04□□□□□ -2.24
Topbp1Q6ZQF0 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.04□□□□□ -2.24
Topbp1Q6ZQF0 CT025525.3-201ENSMUST00000228858 366 ntBASIC1.04□□□□□ -2.24
Topbp1Q6ZQF0 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Topbp1Q6ZQF0 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Topbp1Q6ZQF0 Gm23245-201ENSMUST00000083370 135 ntBASIC1.04□□□□□ -2.24
Topbp1Q6ZQF0 AC124746.1-201ENSMUST00000227535 1300 ntBASIC1.03□□□□□ -2.24
Topbp1Q6ZQF0 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.03□□□□□ -2.24
Topbp1Q6ZQF0 Gm11898-201ENSMUST00000117161 385 ntBASIC1.03□□□□□ -2.24
Topbp1Q6ZQF0 Gm26285-201ENSMUST00000177923 107 ntBASIC1.03□□□□□ -2.24
Topbp1Q6ZQF0 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.03□□□□□ -2.24
Topbp1Q6ZQF0 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.03□□□□□ -2.24
Topbp1Q6ZQF0 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.03□□□□□ -2.24
Topbp1Q6ZQF0 Gm23622-201ENSMUST00000082460 107 ntBASIC1.03□□□□□ -2.24
Topbp1Q6ZQF0 Mir653-201ENSMUST00000102402 85 ntBASIC1.02□□□□□ -2.25
Topbp1Q6ZQF0 Gm14918-201ENSMUST00000118153 268 ntBASIC1.02□□□□□ -2.25
Topbp1Q6ZQF0 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.02□□□□□ -2.25
Topbp1Q6ZQF0 Gm4916-201ENSMUST00000126139 642 ntBASIC1.02□□□□□ -2.25
Topbp1Q6ZQF0 Gm22944-201ENSMUST00000158662 133 ntBASIC1.02□□□□□ -2.25
Topbp1Q6ZQF0 Gm27028-201ENSMUST00000182303 399 ntBASIC1.02□□□□□ -2.25
Topbp1Q6ZQF0 Gm8502-201ENSMUST00000185708 901 ntBASIC1.02□□□□□ -2.25
Topbp1Q6ZQF0 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Topbp1Q6ZQF0 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Topbp1Q6ZQF0 Gm25792-201ENSMUST00000083289 100 ntBASIC1.02□□□□□ -2.25
Topbp1Q6ZQF0 Gm22163-201ENSMUST00000158408 135 ntBASIC1.01□□□□□ -2.25
Topbp1Q6ZQF0 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
Topbp1Q6ZQF0 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.01□□□□□ -2.25
Topbp1Q6ZQF0 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Topbp1Q6ZQF0 Gm25853-201ENSMUST00000082793 132 ntBASIC1.01□□□□□ -2.25
Topbp1Q6ZQF0 Gm23932-201ENSMUST00000082914 107 ntBASIC1.01□□□□□ -2.25
Topbp1Q6ZQF0 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.01□□□□□ -2.25
Topbp1Q6ZQF0 Gm14980-201ENSMUST00000121247 736 ntBASIC1□□□□□ -2.25
Topbp1Q6ZQF0 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1□□□□□ -2.25
Topbp1Q6ZQF0 Gm23172-201ENSMUST00000157160 124 ntBASIC1□□□□□ -2.25
Topbp1Q6ZQF0 Gm25335-201ENSMUST00000158043 103 ntBASIC1□□□□□ -2.25
Topbp1Q6ZQF0 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1□□□□□ -2.25
Topbp1Q6ZQF0 Gm45207-201ENSMUST00000207469 145 ntBASIC1□□□□□ -2.25
Topbp1Q6ZQF0 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1□□□□□ -2.25
Topbp1Q6ZQF0 CT030687.1-201ENSMUST00000221854 162 ntBASIC1□□□□□ -2.25
Topbp1Q6ZQF0 AC121960.3-201ENSMUST00000227077 623 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms