Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm13396-201ENSMUST00000120617 271 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Gm22957-201ENSMUST00000122511 123 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Gm23120-201ENSMUST00000157654 287 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Gm42925-201ENSMUST00000197359 285 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Gm26447-201ENSMUST00000082448 129 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Gm10242-201ENSMUST00000090064 330 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Mir496a-201ENSMUST00000093627 79 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm14119-201ENSMUST00000119511 235 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm13717-201ENSMUST00000119868 365 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm23184-201ENSMUST00000122594 131 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm23053-201ENSMUST00000175136 96 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm24086-201ENSMUST00000175171 98 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm28650-201ENSMUST00000188413 411 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm45315-201ENSMUST00000209283 333 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm18921-201ENSMUST00000221798 366 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm9318-201ENSMUST00000222444 438 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm22247-201ENSMUST00000082476 131 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm24948-201ENSMUST00000082866 207 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm26066-201ENSMUST00000083385 109 ntBASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx55Q6ZPL9 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Gm26275-201ENSMUST00000157101 268 ntBASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Gm22225-201ENSMUST00000157358 278 ntBASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Gm22516-201ENSMUST00000158266 124 ntBASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Gm24885-201ENSMUST00000158783 270 ntBASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Gm26061-201ENSMUST00000175584 108 ntBASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Gm43402-201ENSMUST00000197159 159 ntBASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Gm45403-201ENSMUST00000209453 276 ntBASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ddx55Q6ZPL9 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm13122-201ENSMUST00000118380 453 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm13419-201ENSMUST00000121711 271 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm24691-201ENSMUST00000157762 140 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Mir6346-201ENSMUST00000183982 81 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29512-201ENSMUST00000185544 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28110-201ENSMUST00000185782 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28838-201ENSMUST00000186338 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29057-201ENSMUST00000186468 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29661-201ENSMUST00000186781 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28737-201ENSMUST00000186808 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29118-201ENSMUST00000186908 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28433-201ENSMUST00000187085 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29635-201ENSMUST00000187221 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28759-201ENSMUST00000187621 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28831-201ENSMUST00000187739 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28200-201ENSMUST00000187778 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29026-201ENSMUST00000187787 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28752-201ENSMUST00000188340 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28797-201ENSMUST00000188543 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28855-201ENSMUST00000188680 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29378-201ENSMUST00000188723 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28569-201ENSMUST00000188748 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28120-201ENSMUST00000188812 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28369-201ENSMUST00000188993 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29037-201ENSMUST00000189092 313 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28909-201ENSMUST00000189406 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28705-201ENSMUST00000189548 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28861-201ENSMUST00000189681 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29180-201ENSMUST00000190003 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28939-201ENSMUST00000190351 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm28223-201ENSMUST00000190469 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29575-201ENSMUST00000190597 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29092-201ENSMUST00000190768 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm29469-201ENSMUST00000191448 315 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm43739-201ENSMUST00000198294 307 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm43914-201ENSMUST00000203592 594 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm45207-201ENSMUST00000207469 145 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm45395-201ENSMUST00000209891 559 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.62□□□□□ -1.83
Ddx55Q6ZPL9 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms