Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.71□□□□□ -1.81
Scaf4Q6PFF0 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm23472-201ENSMUST00000101806 191 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm14551-201ENSMUST00000120802 256 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm11204-201ENSMUST00000122438 147 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm22036-201ENSMUST00000157279 215 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm25220-201ENSMUST00000157546 95 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm24552-201ENSMUST00000158646 103 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm24497-201ENSMUST00000177868 191 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm27535-201ENSMUST00000183814 157 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm1833-201ENSMUST00000191608 682 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm37617-201ENSMUST00000194309 159 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Mir5121-201ENSMUST00000198528 74 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm45907-201ENSMUST00000213023 193 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm25813-201ENSMUST00000082748 191 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm23444-201ENSMUST00000082922 191 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm25481-201ENSMUST00000083221 158 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Mir302d-201ENSMUST00000083513 66 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Mir21a-201ENSMUST00000083521 92 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.71□□□□□ -1.82
Scaf4Q6PFF0 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Mir466p-201ENSMUST00000103925 89 ntBASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gm14688-201ENSMUST00000119169 303 ntBASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gm25967-201ENSMUST00000157168 147 ntBASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gm25115-201ENSMUST00000157187 140 ntBASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gm26022-201ENSMUST00000158663 108 ntBASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Snord92-201ENSMUST00000175548 85 ntBASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gm22294-201ENSMUST00000083308 104 ntBASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.7□□□□□ -1.82
Scaf4Q6PFF0 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm12238-201ENSMUST00000127764 124 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm23466-201ENSMUST00000157133 106 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm23584-201ENSMUST00000157655 129 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm24131-201ENSMUST00000158539 107 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm23023-201ENSMUST00000158767 109 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm28627-201ENSMUST00000186141 453 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm37417-201ENSMUST00000195257 454 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm43853-201ENSMUST00000197162 301 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm23042-201ENSMUST00000083866 101 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Gm26314-201ENSMUST00000083891 107 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scaf4Q6PFF0 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Gm25421-201ENSMUST00000104218 164 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Gm12252-201ENSMUST00000119517 219 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Gm22890-201ENSMUST00000158642 144 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Gm27695-201ENSMUST00000184301 91 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Gm38270-201ENSMUST00000192721 407 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Gm44520-201ENSMUST00000205447 802 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Gm23454-201ENSMUST00000083332 133 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Scaf4Q6PFF0 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms