Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm43250-201ENSMUST00000196536 273 ntBASIC3.35□□□□□ -1.87
Rnf220Q6PDX6 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.35□□□□□ -1.87
Rnf220Q6PDX6 Gm19563-201ENSMUST00000222031 270 ntBASIC3.35□□□□□ -1.87
Rnf220Q6PDX6 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.35□□□□□ -1.87
Rnf220Q6PDX6 Gm25481-201ENSMUST00000083221 158 ntBASIC3.35□□□□□ -1.87
Rnf220Q6PDX6 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Rnf220Q6PDX6 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.35□□□□□ -1.87
Rnf220Q6PDX6 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Rnf220Q6PDX6 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm11460-201ENSMUST00000118200 361 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm15213-201ENSMUST00000122098 216 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm14402-201ENSMUST00000122217 508 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm24908-201ENSMUST00000157294 127 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm22211-201ENSMUST00000158097 156 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Mir1947-201ENSMUST00000158235 85 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm24878-201ENSMUST00000158782 104 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm29064-201ENSMUST00000187014 813 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm44476-201ENSMUST00000196225 91 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm42739-201ENSMUST00000200687 226 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm43441-201ENSMUST00000201458 205 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm35857-201ENSMUST00000212739 178 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Gm23443-201ENSMUST00000082916 128 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Mir27a-201ENSMUST00000083510 87 ntBASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Rnf220Q6PDX6 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Rnf220Q6PDX6 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Rnf220Q6PDX6 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm7853-201ENSMUST00000100708 478 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm23948-201ENSMUST00000104030 132 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm24281-201ENSMUST00000104234 136 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Mir291a-201ENSMUST00000104815 82 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm23098-201ENSMUST00000157552 299 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm24348-201ENSMUST00000158710 130 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Mir6963-201ENSMUST00000183535 71 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm27521-201ENSMUST00000184022 64 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Mir7028-201ENSMUST00000185016 64 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm37713-201ENSMUST00000191746 198 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Mir7116-201ENSMUST00000195956 70 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Snora23-201ENSMUST00000082517 184 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Gm24316-201ENSMUST00000083041 107 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Snord22-201ENSMUST00000083153 126 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Rnf220Q6PDX6 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm13378-201ENSMUST00000117483 336 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm15211-201ENSMUST00000118932 528 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm12793-201ENSMUST00000119268 292 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm13967-201ENSMUST00000120404 380 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm23716-201ENSMUST00000157348 144 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm22447-201ENSMUST00000158155 92 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm22395-201ENSMUST00000177427 96 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm20693-201ENSMUST00000177431 211 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm17951-201ENSMUST00000198536 496 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm43901-201ENSMUST00000203247 453 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm23451-201ENSMUST00000083328 122 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Mir32-201ENSMUST00000083610 70 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm23731-201ENSMUST00000083749 107 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Rnf220Q6PDX6 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm14299-201ENSMUST00000117586 397 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm25269-201ENSMUST00000122601 104 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm24846-201ENSMUST00000158033 108 ntBASIC3.31□□□□□ -1.88
Rnf220Q6PDX6 Gm24726-201ENSMUST00000158232 121 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 114.8 ms