Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.56□□□□□ -2
Herc4Q6PAV2 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Herc4Q6PAV2 Gm25859-201ENSMUST00000083710 91 ntBASIC2.56□□□□□ -2
Herc4Q6PAV2 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Herc4Q6PAV2 Gm23422-201ENSMUST00000102000 107 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm14652-201ENSMUST00000118479 235 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm15443-201ENSMUST00000118947 820 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm14848-201ENSMUST00000121850 467 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm23889-201ENSMUST00000122689 104 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm25559-201ENSMUST00000157182 74 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm22666-201ENSMUST00000158717 164 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm17062-201ENSMUST00000166987 461 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm42622-201ENSMUST00000197229 355 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Mir378a-201ENSMUST00000198300 66 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm44142-201ENSMUST00000203358 311 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm44524-201ENSMUST00000203899 271 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Herc4Q6PAV2 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm8125-201ENSMUST00000216602 738 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm18774-201ENSMUST00000218269 601 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 AC154245.1-201ENSMUST00000224615 601 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Herc4Q6PAV2 Gm23727-201ENSMUST00000083352 164 ntBASIC2.55□□□□□ -2
Herc4Q6PAV2 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm14602-201ENSMUST00000118625 340 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm4468-201ENSMUST00000170206 294 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.54□□□□□ -2
Herc4Q6PAV2 Mir5099-201ENSMUST00000175257 74 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm24168-201ENSMUST00000178825 107 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm27957-201ENSMUST00000184054 127 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm8151-201ENSMUST00000184817 871 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm9236-201ENSMUST00000196892 587 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm45013-201ENSMUST00000206883 178 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm45522-201ENSMUST00000210784 166 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm19441-201ENSMUST00000221545 330 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm23247-201ENSMUST00000083373 107 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.54□□□□□ -2
Herc4Q6PAV2 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Herc4Q6PAV2 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.54□□□□□ -2
Herc4Q6PAV2 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Herc4Q6PAV2 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm11420-201ENSMUST00000120047 402 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm11556-201ENSMUST00000120751 288 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm11834-201ENSMUST00000122257 585 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm24937-201ENSMUST00000122597 134 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm15914-201ENSMUST00000161922 309 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Mir3075-201ENSMUST00000175340 85 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm23862-201ENSMUST00000180342 94 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm28169-201ENSMUST00000190342 345 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm37658-201ENSMUST00000192672 315 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm44478-201ENSMUST00000204875 114 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm6796-201ENSMUST00000211919 243 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm19572-201ENSMUST00000214326 338 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.53□□□□□ -2
Herc4Q6PAV2 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm22806-201ENSMUST00000082738 136 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm23093-201ENSMUST00000083450 102 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm26166-201ENSMUST00000083788 107 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Mir127-201ENSMUST00000093568 70 ntBASIC2.53□□□□□ -2
Herc4Q6PAV2 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Herc4Q6PAV2 Gm14073-201ENSMUST00000117344 381 ntBASIC2.52□□□□□ -2.01
Herc4Q6PAV2 Gm15029-201ENSMUST00000119742 199 ntBASIC2.52□□□□□ -2.01
Herc4Q6PAV2 Gm11359-201ENSMUST00000120039 567 ntBASIC2.52□□□□□ -2.01
Herc4Q6PAV2 Gm7916-201ENSMUST00000120325 456 ntBASIC2.52□□□□□ -2.01
Herc4Q6PAV2 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.52□□□□□ -2.01
Herc4Q6PAV2 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.52□□□□□ -2.01
Herc4Q6PAV2 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms