Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm16331-201ENSMUST00000144274 498 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Mir7091-201ENSMUST00000184075 79 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm27735-201ENSMUST00000185085 76 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm43228-201ENSMUST00000200735 264 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 AC158388.1-201ENSMUST00000225441 256 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 n-R5s79-201ENSMUST00000083071 120 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm24385-201ENSMUST00000122694 350 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm17061-201ENSMUST00000163167 499 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm24561-201ENSMUST00000175182 95 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Mir6402-201ENSMUST00000183406 80 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm29641-201ENSMUST00000188955 259 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm37720-201ENSMUST00000195497 1241 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm42958-201ENSMUST00000197595 318 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm42976-201ENSMUST00000200313 222 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm18252-203ENSMUST00000215855 757 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 AC159293.2-201ENSMUST00000222289 424 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm24018-201ENSMUST00000083232 107 ntBASIC0.33□□□□□ -2.36
Col7a1Q63870 Gm14885-201ENSMUST00000117969 496 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm14884-201ENSMUST00000120456 196 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 AC133076.1-201ENSMUST00000228074 484 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm23455-201ENSMUST00000083331 100 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Col7a1Q63870 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm22957-201ENSMUST00000122511 123 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm27722-201ENSMUST00000183908 76 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm10925-201ENSMUST00000189941 678 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm37979-201ENSMUST00000193065 712 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm46194-201ENSMUST00000218136 320 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm23245-201ENSMUST00000083370 135 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm24412-201ENSMUST00000083426 109 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm44286-201ENSMUST00000204098 1487 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm45262-201ENSMUST00000209917 1463 ntBASIC0.32□□□□□ -2.36
Col7a1Q63870 Gm11322-201ENSMUST00000118095 435 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm12191-201ENSMUST00000118307 348 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm24903-201ENSMUST00000158131 126 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm23181-201ENSMUST00000158685 110 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm16147-201ENSMUST00000162143 373 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC0.31□□□□□ -2.36
Col7a1Q63870 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 AC163289.1-201ENSMUST00000215919 262 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm24805-201ENSMUST00000082931 104 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm14748-201ENSMUST00000119819 411 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm12837-201ENSMUST00000120131 373 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm36638-201ENSMUST00000193295 400 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm37399-201ENSMUST00000195224 416 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC0.31□□□□□ -2.36
Col7a1Q63870 Mir7215-201ENSMUST00000200383 51 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Col7a1Q63870 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm14868-201ENSMUST00000117840 216 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm12137-201ENSMUST00000119565 346 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm9703-201ENSMUST00000119573 343 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm11857-201ENSMUST00000119817 324 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm2966-201ENSMUST00000166052 481 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm17204-201ENSMUST00000167936 478 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm7897-201ENSMUST00000193981 554 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 Gm44910-201ENSMUST00000208451 396 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 CT030166.2-201ENSMUST00000222021 368 ntBASIC0.31□□□□□ -2.36
Col7a1Q63870 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 Gm26011-201ENSMUST00000104410 104 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 Gm27717-201ENSMUST00000183933 151 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 Mir6399-201ENSMUST00000184050 84 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.3□□□□□ -2.36
Col7a1Q63870 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Col7a1Q63870 Trbv24-201ENSMUST00000194614 347 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 AC165284.1-201ENSMUST00000228614 458 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 Gm24271-201ENSMUST00000102327 111 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Col7a1Q63870 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC0.3□□□□□ -2.36
Col7a1Q63870 Gm29011-201ENSMUST00000191059 712 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 Gm45071-201ENSMUST00000205353 571 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 Gm7692-201ENSMUST00000213534 409 ntBASIC0.3□□□□□ -2.36
Col7a1Q63870 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Col7a1Q63870 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm24126-201ENSMUST00000104111 106 ntBASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm25107-201ENSMUST00000122472 129 ntBASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Col7a1Q63870 Gm34139-201ENSMUST00000196166 294 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms